| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00275 |
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| Symbol | lacZ |
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| ID | 6775998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 298542 |
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| End bp | 301667 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642753703 |
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| Product | beta-D-galactosidase |
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| Protein accession | YP_002124587 |
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| Protein GI | 196155098 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCG TTGCGCAGAT AGTGGCTCAA AACGATTGGC AAAACCCCGT GGTATTTCAG
AGAAACCGAG TAGGCGGCCA CAGCCCACAT CACGGTTATA AAACGTTAGA AGATGCCCTA
CATAACGCCA ATGCGCAAAA GTACCTTTTA AATGGAGAAT GGGACTTTTG TTTGTTCGAC
GCGCCTGAAC AGGTGCCCGA AAGCCTGCTG GCCGCTACAT TAAGTGCCGA AGAGCGGGCA
AAATGGCAAT CCATTGTTGT GCCCTCAAAC TGGCAACTAA AGGGCTACGA TAAACCTATT
TACTGCAACG TTAAGTATCC TTTCCCGGTA AACCCACCGA TAGTACCCAG TGAAAACCCT
ACCGGATGCT ACCGAACCAC GTTTAGCGTA ACCAGCGCGC AGTTATCTCA ACGCAACCAC
ATTGTATTTG AGGGGGTGAA CAGCGCCTTC CACTTATGGT GTAACGGTGA GTATGTTGGC
TATTCGCAAG ATAGTCGTTT ACCGGCAGAA TTCGACATAT CCAATTTGTT GGTCGAGGGC
GAGAACCGCT TAGCGGCCAT GGTCATCAGG TGGTCTGACG GCAGCTACTT AGAAGATCAA
GACATGTGGT GGCTAAGCGG TATTTTCCGT GATGTAAGCT TAATTACAAA GCCACGTCAG
CACATTCAAG ATGTGTTTGT TACGCCCACG CTAGATGCTT GTTATCGCGA CGCTACTGTG
TCTGTTCGAA CGTCAATTAA AGCGCAGTTA CGCTGCAAAG TAGGTATTCA GCTTTTCGAT
GGTGACACGA CTGTTACCGA ACAAATCGTT ACGGGCACCA ACAATAAGCG TGTCGACGAG
AAAGGCGGGT GGGACGATGT CGTCTTTCAA ACCCTAGAAG TTAAAGAGCC AAAACACTGG
ACAGCAGAAA CCCCTTACCT TTATCGCATT GTTGTATCGC TGATTGATGA TAGCGGTAAT
GTGATAGACC GTGAAGCCTA CAACGTGGGT TTCCGAAATG TTGAAATGAA AAATGGGCAG
CTTCTTGTTA ACGGCAAGGC TGTGCTTATT CGCGGTGTAA ATCGTCACGA ACACCATCAA
GTAAAAGGCC ATGCCATCAA CGAAGATGAT ATGCTTGAAG ATATTAAACT ATTAAAGCAG
AACAACTTCA ATGCGGTGCG CACTGCGCAT TATCCTAATC ACCCTCGCTG GTATGAACTT
TGTGATGAAT ACGGGCTTTA TGTGGTTGAT GAAGCCAATA TCGAAACCCA CGGTATGTTT
CCAATGGGGC GGCTGTCCCG CGACCCGCTA TGGGCTGGCG CTTACATGGC GCGTTTTACC
CAAATGGTAG AACGCGATAA AAACCACCCC AGTATTATCA TCTGGTCGTT AGGCAATGAA
TGTGGTCATG GCCCTACGCA TGATGCCATG TATGGCTGGG CAAAATCTTT CGACCCGTCT
CGGCCTGTTC AATATGAAGG TGGCGGTGCC GACACTACGG CTACCGATAT CATAGCGCCT
ATGTATGCAC GTGTAGATAC TGACGTAGAA GACGACGCTG TGCCTAAATG GGCAATAAAA
AAATGGCTGT CGCTACCTGG TGAAAACCGG CCCGTTATTT TATGCGAATA CGCCCATGCT
ATGGGGAATA GTTTGGGGAG TTTTGATGAG TATTGGAAAG CCTTCAAAGA CTATCCACGT
CTTCAAGGCG GCTTTATTTG GGACTGGGTT GACCAAGGGC TGACGAAACA CACTGATAGC
GGCGACGCGT TCTGGGCTTA CGGCGGTGAC TTTGGCGATA CCGACAACGA CAGACAGTTT
TGTATCAACG GGCTGTTATT CCCTGACAGA ACCCCACACC CGCATTTATT TGAAGCGAAA
TATTGTCAGC AACACCTAAG CTTTTCGTTA ACGGAAGAGA CTGACAAGTG GCAGCTTAGC
GTAAAGAGTG ACTACCTGTT TAGACATACC GATAATGAGC TGCTTCGCTG GCAGGTGTTA
GAGAATGGTA AACCCATCAT AGAAGGGGAG TGCCCCATTT ATGTTGCACC ACAGCAAGCC
CAAACCGTTA GTATCGCGCC CGAAATCAAT TTTAAAGCCG GCGCACTCTA TCACCTAAAT
ATCGACGTTG TATTAGCTAA CGACTGTGCA TGGGCGAAGG CAGGCCATGT TATCGATACC
GCGCAGCTTG CGCTAGCTAA CAAAAGCGGG CTAATTCCTT TTGTCTCAAC CGCTAACGTC
GCAAATGAAA ATGCTGAGTC TGGAGTGACG GTCAAGGCAG AAAACACCAC CTTATTAGTC
AGTGTGAAAA ATAACGTATT TAGTTTTAAT AGCGAAAGTG GGCTTTTAAC CTCGTGGCTA
CATGAAGATA GCGAGATGCT CAGCGCACCG CTAGAAGATA ACTTTTTTAG AGCCCCGCTT
GATAACGATA TTGGTGTAAG TGAAGTTGAT AACCCCGACC CAAATGCATG GGAGTCGCGC
TGGCGCCGTG CTGGTATTGG AAAGTGGGAC CGCATCTGCA CCAGTGTAGA CGTAGAGCAG
AGTACCTTTG ATGTGCGCAT AACGTCGTTA TTTGAGTATC ATTATAACGA CAAGCTCATT
GCCGCAACCA AGTGGGTTTA CACCATTAAC CACCAGGCAG CGTTAACCGT AGAGGTAGAA
GTGTTATTGG ATGATAGTTT ACCGCCCATG CCTCGAATTG GTTTGCAAGC CGCGGTACCG
GCGCCCCGTA GCAACGAGCA AGAGCGAATG CGCGTTACAT GGCAAGGGCT AGGGCCTTTC
GAAAATTACC CAGACAGGAA AGCGGCAGCG CGTTTTGGTG AGCACTCGTT GTCGATAGCC
GATTTGCAAA CACACTATAT ATTTCCTACT GACAACGGTT TGCGTAGTGA CTGTAAACAA
TTAAATATTA GTGGGCTAAG AGTGAACGGG CAGTTTTGCT TTAGTGTAAG CGAGTACGGC
CAAGTGCAGC TAGATACTGC AAAGCATACT AGCGACCTCA TGCCGCAAGA CTGTGTGTTT
GTGTATATTG ATCATGCACA TATGGGCGTA GGCGGCGACG ACTCGTGGAG CCCTAGCACG
CATAAAGCCT TCTTGATAGA AGAGAAGTGT TACCGTTATT CGGTGACATT CTGTGCGAAG
GTATGA
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| Protein sequence | MKTVAQIVAQ NDWQNPVVFQ RNRVGGHSPH HGYKTLEDAL HNANAQKYLL NGEWDFCLFD
APEQVPESLL AATLSAEERA KWQSIVVPSN WQLKGYDKPI YCNVKYPFPV NPPIVPSENP
TGCYRTTFSV TSAQLSQRNH IVFEGVNSAF HLWCNGEYVG YSQDSRLPAE FDISNLLVEG
ENRLAAMVIR WSDGSYLEDQ DMWWLSGIFR DVSLITKPRQ HIQDVFVTPT LDACYRDATV
SVRTSIKAQL RCKVGIQLFD GDTTVTEQIV TGTNNKRVDE KGGWDDVVFQ TLEVKEPKHW
TAETPYLYRI VVSLIDDSGN VIDREAYNVG FRNVEMKNGQ LLVNGKAVLI RGVNRHEHHQ
VKGHAINEDD MLEDIKLLKQ NNFNAVRTAH YPNHPRWYEL CDEYGLYVVD EANIETHGMF
PMGRLSRDPL WAGAYMARFT QMVERDKNHP SIIIWSLGNE CGHGPTHDAM YGWAKSFDPS
RPVQYEGGGA DTTATDIIAP MYARVDTDVE DDAVPKWAIK KWLSLPGENR PVILCEYAHA
MGNSLGSFDE YWKAFKDYPR LQGGFIWDWV DQGLTKHTDS GDAFWAYGGD FGDTDNDRQF
CINGLLFPDR TPHPHLFEAK YCQQHLSFSL TEETDKWQLS VKSDYLFRHT DNELLRWQVL
ENGKPIIEGE CPIYVAPQQA QTVSIAPEIN FKAGALYHLN IDVVLANDCA WAKAGHVIDT
AQLALANKSG LIPFVSTANV ANENAESGVT VKAENTTLLV SVKNNVFSFN SESGLLTSWL
HEDSEMLSAP LEDNFFRAPL DNDIGVSEVD NPDPNAWESR WRRAGIGKWD RICTSVDVEQ
STFDVRITSL FEYHYNDKLI AATKWVYTIN HQAALTVEVE VLLDDSLPPM PRIGLQAAVP
APRSNEQERM RVTWQGLGPF ENYPDRKAAA RFGEHSLSIA DLQTHYIFPT DNGLRSDCKQ
LNISGLRVNG QFCFSVSEYG QVQLDTAKHT SDLMPQDCVF VYIDHAHMGV GGDDSWSPST
HKAFLIEEKC YRYSVTFCAK V
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