Gene MADE_00187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00187 
Symbol 
ID6776119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp199984 
End bp200727 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content46% 
IMG OID642753615 
Productglutaredoxin 
Protein accessionYP_002124499 
Protein GI196155010 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAC GCGCCACCCT TTATCGTATG GTCATGCCGA ACCATATTTG TCCTTTTGGG 
CTCAAGTCGA AAGACTTGCT GGAAAGAAAA GGCTTTGAGG TTAACGACCA CCATTTAACG
ACTCGCAGTG AAACCGATGC ATTTAAAGAA AAGCATGAGG TAAAAACCAC GCCCCAAACC
TTTATTGATG ACAAACGCAT TGGCGGTTAC GACGACCTAA GAGATTATTT TAACCTAAAG
CAAGAAAGTG AATTTGGGTC TCGCTATACG CCCATTATCG TTATTTTCTC GTTAGCTGCA
TTGATGGTAG CTGCACTTAT GCTAAAAGGC GGCCTAGCCG CTGATGTAGA ACCGTTTGTG
ATGAACTTTA TCGGTATCAC TATGGTCATT CTCGCCTTAC AGAAACTGCA GGATTTAGTC
GCGTTTTCAA ACCAGTTTAT CACCTATGAT CTGCTGGCAA TGAAGCACGT GCGTTACGCT
TATGTTTACC CCTTTGCTGA AGCCTACGCT GGTTTAGGCA TGCTCGCCGG GCTACCTGCG
CTTATGGTAT CGCCAGTTTC TATATTCATT GGTGCAATCG GCGCTGTATC TGTCATAAAA
GCAGTATATG TAGACAAGCG AGAGCTTAAG TGTGCCTGCG TTGGCGGTAA TTCAGACCTG
CCCCTTGGCT TTATCTCGTT AACAGAGAAT CTCGCCATGT TTGGTGCAGG CCTGTATATG
TTGGTTAACT GGCTCGCCCT CTAA
 
Protein sequence
MSKRATLYRM VMPNHICPFG LKSKDLLERK GFEVNDHHLT TRSETDAFKE KHEVKTTPQT 
FIDDKRIGGY DDLRDYFNLK QESEFGSRYT PIIVIFSLAA LMVAALMLKG GLAADVEPFV
MNFIGITMVI LALQKLQDLV AFSNQFITYD LLAMKHVRYA YVYPFAEAYA GLGMLAGLPA
LMVSPVSIFI GAIGAVSVIK AVYVDKRELK CACVGGNSDL PLGFISLTEN LAMFGAGLYM
LVNWLAL