Gene MADE_00180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00180 
Symbol 
ID6775893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp190211 
End bp190927 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content50% 
IMG OID642753608 
Producthypothetical protein 
Protein accessionYP_002124492 
Protein GI196155003 
COG category[S] Function unknown 
COG ID[COG4446] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGCAC TCATTGCCCT AACCAGCATA GTTGGTTTTC TCATGGTGGT ATTGCCTGGC 
CCACTGTATC AATACGCTGG CGTCAGCCTA GGCACCGCGT TTACATCGTT ACGCTTCGGC
GTATATGTCG GCGGCGCAGC CATCATACTT ATTATTTTGC AGGTATTACT AAACCGTAAA
AACGTAAACT GGGGCAGTAC GCTTGTTTGC GCTATTCTTG CGCTAATTGC GGTAGGCATG
CCGGTTAGCA TGATGAGCAA GGCAAGCGCG GTTCCCCCCA TTCACGATAT CACCACCGAC
GTGACAAACC CACCCGAATT TGTAGCTATC GCACCACTGC GCGAAGGCGC GCCTAACTCG
GTAGCCTATG AAGGCGGCGA CGTCACCAAA CAGCAGATAG AAGCCTACCC TGAAATTAAA
ACTCAACTGT TGCCACAGCC CGTCAATGAA GTTTATATGG CCGCAGAGAA AGCGATAGAG
GCACTGGGTT GGGAACGCGT TAGCGATGGC GCTTTACCTA ACACACTGGA AGCCACCGAC
ACCACCACTT GGTTCGGCTT CAAAGACGAC GTGGTTATCA GGTTAACCGC TAAAAGCGAT
GACACCTTTG TTGATGTACG CAGTAAATCA CGCGTAGGGA AAAGCGATTT AGGCAAAAAT
GCTGAGCGTA TTGAAACTTT TATGGCCGAA CTTAGAAGCC AGCTAGGGTA TTACTAA
 
Protein sequence
MKALIALTSI VGFLMVVLPG PLYQYAGVSL GTAFTSLRFG VYVGGAAIIL IILQVLLNRK 
NVNWGSTLVC AILALIAVGM PVSMMSKASA VPPIHDITTD VTNPPEFVAI APLREGAPNS
VAYEGGDVTK QQIEAYPEIK TQLLPQPVNE VYMAAEKAIE ALGWERVSDG ALPNTLEATD
TTTWFGFKDD VVIRLTAKSD DTFVDVRSKS RVGKSDLGKN AERIETFMAE LRSQLGYY