Gene MADE_00166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00166 
Symbol 
ID6776915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp178074 
End bp179255 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content49% 
IMG OID642753594 
Productpredicted flavoprotein 
Protein accessionYP_002124478 
Protein GI196154989 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGC GCGATGTAAT AGTGATTGGG GCCGGCGCAG CTGGGCTTTT TTGTGCAGCA 
CAGGCAGGCG CGCGCGGACG CAGCGTAGAG GTGCTTGACC ATGCCAAAAA AGTTGGGCGT
AAAATTCTTA TGTCGGGCGG CGGTCGTTGT AACTTTACCA ATATGTATGC CGGGCCTGAA
AACTTTCTAT CGCAAAACCC CCATTTTTGT AAGTCGGCGC TTAGCCGCTA TACCCAATGG
GACTTTATCG GTTTAGTGGC CGAACATGGC ATTGCCTATC ATGAGAAGAC ATTGGGCCAA
TTATTTTGTG ATGATAGCGC CAAAGACATC GTTGACTTAC TGCTTAATGA ATGTAGTAAA
GCGGGCGTTA CCATTACTAC CCGCTGTGAA ATTTTAAGCG TAGAAAAAAA CGAAAGTGGG
TATTCACTTA CAACGTCGAG CGGCGAATAT AGCTGTGAAT CTTTAGTTAT CGCGACGGGC
GGTTTAAGCA TGCCAAAGCT GGGGGCCACA CCGTTTGGTT ACAAAGTTGC CGAGCAATTT
GGTCTTAAGG TTTTACCTAC TCGGGCAGCC CTTGTTCCCT TTACCCTGCA CGATAAAGAC
AAAGATATCT TGGCAGAACT TAGCGGTATC GCGGTAGATG TATACGCAAG CTGTAACGAC
ACCACGTTTA AAGAAGCCAT GCTGTTTACC CACCGCGGTT TAAGCGGCCC AGCCATGCTA
CAAATATCTA GCTACTGGGA AGCGGGTGAC AGCTTAAGTA TCAACACGCT TCCCAATGAC
GATGCCACTG CGCTTGTACA AACCGCGCGT AACGAAACGC CCGATGCCCT GCTTGCTACC
TCTTTAAATA AAGTATTCCC CAAGCGCATG GTACAGAGCT TTATTGAGTA TCATAACTGG
CGCAATGTGC CGGTAAAACA GCTTACCCAC AGCGAATGTG ATGCCATTGC TGATACGTTA
GAAAATTGGC AGGTGAAACC CAATGGCACC GAAGGTTACC GCACCGCAGA AGTCACCATT
GGTGGGGTAG ATACCAACGA GTTATCGTCT AAAACCATGA TGGCCAAAAA CGTGGAAGGC
CTCTACTTCA TTGGCGAAGT GGTAGACGTC ACTGGCTGGC TAGGCGGCTT TAATTTCCAA
TGGGCGTGGA GCAGCGGCTG GGCAGCAGGG CAGGAGGTTT AA
 
Protein sequence
MIKRDVIVIG AGAAGLFCAA QAGARGRSVE VLDHAKKVGR KILMSGGGRC NFTNMYAGPE 
NFLSQNPHFC KSALSRYTQW DFIGLVAEHG IAYHEKTLGQ LFCDDSAKDI VDLLLNECSK
AGVTITTRCE ILSVEKNESG YSLTTSSGEY SCESLVIATG GLSMPKLGAT PFGYKVAEQF
GLKVLPTRAA LVPFTLHDKD KDILAELSGI AVDVYASCND TTFKEAMLFT HRGLSGPAML
QISSYWEAGD SLSINTLPND DATALVQTAR NETPDALLAT SLNKVFPKRM VQSFIEYHNW
RNVPVKQLTH SECDAIADTL ENWQVKPNGT EGYRTAEVTI GGVDTNELSS KTMMAKNVEG
LYFIGEVVDV TGWLGGFNFQ WAWSSGWAAG QEV