Gene MADE_00140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00140 
Symbol 
ID6779019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp149004 
End bp150230 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content48% 
IMG OID642753568 
Producthypothetical protein 
Protein accessionYP_002124452 
Protein GI196154963 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein
[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATACCG TTGAATTTAT TCAAATTCGT AAATTTATAG TGAAGCTAGG AAAAATGCTG 
CACAAGTACG GTACGCCTGC GTTCCGTCTT GAAGCTTACC TCGGTGAAGT CGCCAAATAT
CTGGGCGTAC ACGCTTCATT TATTTCGACG CCCACGTCAC TAACTTTTGT TATCTGGAGC
GACCGTCACG AAGACGAATA CAACCATGCT GCGCGATTAC AGCCTGGCGA CCTAGACATG
AATGCACTGT CGCTAACCGA TGAATTAGCC AGCGAGTTGC TATCGGGAAA CCTGTCGCTA
ACTGAAGCCG ATAAGCGCCT AAATGAAATA GATGCCATGG GTAGCCCTTA CGGTAAGTTA
TCTACCGGAA CGGCGTTTGC CATGGCAACA GGTGCATTCG CTATGCTAAT GGGTGCAAGC
TGGAGTGAAA TAGGTTGGTC TGCAGCACTG GGGATAGTGG CGTACTTATG GACCTTATGG
GCACAGCAAT CTAAACGGGT AAACCTGATG TTAGAGCCGG TCACCGCGTT CGTAGGCGGC
ATTCTAACTT GCGCAATCAG CCGATATATA GACCCGGGTA TGAACATTCC CCTAGTTGTA
CTTTCGTCGG TGATTGTATT TGTGCCAGGC CTTGCCCTGA CTATGGGATT AGCGGAACTA
TCTTCGCGCA ATATGGTGTC GGGCACCGCT CGTACCATGG ACGCCATTAT GCAGTTATTC
AAACTGTATT TTGGTGCATT TTTAGGTGTA TCGGTAGGCT TTAGCGTGTT TGGTGAAAAC
GTGTATACCC CAGCAGAGTC ACTACCTTAC TGGGCGACTT GGCTTGCTGT ATTCCTATTG
TGTATTGCGC TAGTTGCAAT ATTTAGAACC CGCCTTAAGC ACATACCTTG GGCATTGGCA
GCGGCGTTTA TCGCATACAG CGCAACGGCG TGGAGTTCAG ATTACATGAG CCCGGGGCTA
GGCGCTTTCG TAGGTGCATT TGCGTTGGGT ATTTTTGCTA ATGCGTTTAC CCGCATTGCC
AATCAGCCCG CTACTATTGT GGCGATGCAC GGGCTAATTG TATTAGTGCC GGGGTCGAAA
ACCTACATTG GCTTAAACTC GTTTATGACG GGCCAAGACT TTGTAAAAGC CGATCATTTA
GGCCAAGAAG TGTTTCTTAT CTTCATGTCG TTAGTGGCAG GGCTGATATT TGCCAACGTT
GTTATGCCTA CGAAAAAGGC GCTATAA
 
Protein sequence
MDTVEFIQIR KFIVKLGKML HKYGTPAFRL EAYLGEVAKY LGVHASFIST PTSLTFVIWS 
DRHEDEYNHA ARLQPGDLDM NALSLTDELA SELLSGNLSL TEADKRLNEI DAMGSPYGKL
STGTAFAMAT GAFAMLMGAS WSEIGWSAAL GIVAYLWTLW AQQSKRVNLM LEPVTAFVGG
ILTCAISRYI DPGMNIPLVV LSSVIVFVPG LALTMGLAEL SSRNMVSGTA RTMDAIMQLF
KLYFGAFLGV SVGFSVFGEN VYTPAESLPY WATWLAVFLL CIALVAIFRT RLKHIPWALA
AAFIAYSATA WSSDYMSPGL GAFVGAFALG IFANAFTRIA NQPATIVAMH GLIVLVPGSK
TYIGLNSFMT GQDFVKADHL GQEVFLIFMS LVAGLIFANV VMPTKKAL