| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00104 |
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| Symbol | |
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| ID | 6775325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 105196 |
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| End bp | 108225 |
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| Gene Length | 3030 bp |
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| Protein Length | 1009 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642753534 |
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| Product | cation efflux system protein CzcA |
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| Protein accession | YP_002124418 |
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| Protein GI | 196154929 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTGTAC TTGGCGCTTT CATTGGGCTG ACTGCTTTTG GAATTAACGC CTGGTTGAAT
CTGCCTGTCG ATGCATTTCC TGATATTTCG CCAACACAAG TTAAGGTCAT CATGAAAGCA
AATGGCATGA CCGCAGAAGA AGTAGAAGCG CAAATAACCC AGCCCATAGA AACCGAGTTG
TTAGGTATTC CACATCAGAC CATTTTGCGT TCAACCACGA AATACGCCAT TACATCCATA
ACGCTAGATT TTGAACAAGG CACAGATATA TATTGGGCCA GGCAGCAAGT AAGCGCACGC
TTAGCAAGCG TGGCCGATTT GCTGCCAGCC ATTGCCGAAG GCGGGCTCGC GCCTATGAGT
ACCCCGTTGT CTGAAATGTT TATGTTCACC ATAGAAAACC CAAACCTATC ACTGCAAGAA
CGCAAGCATA TTCTCGATTG GCAAATACGC CCTGTGCTTC GTACCGTAGC CGGCGTTGCC
GATGTGAACG TATTAGGCGG GTTTACTCGA ACATTTCAGT TTGCGCCCGA TTTATCGCGC
TTAGTTGCCT ATGGGTTTAG TTTAAATCAA CTAGAAACAG CTCTGGCCGA AGCCAATATG
AATGGAAGCG TTGGGCGAGT GCGAGCAGGC GCCGACTCAC TTGTGATCAG AACGCAAAGC
CGCGCCACAA GCCTTGAAGA GCTCGCGGAG TTAGTAGTAG GCAACGTAGA CGGGCAGCCG
GTAAGGCTAT CTGATCTCGG TACGCTCTCC CTTGGCAGCC TTACGCGCTA TGGCGGGGTA
ACCCGAAACG GAGAAGAGAC TACTCAAGCG TTAATCGTAG CGCTAAAAGA CAGTAACACA
GCCAGCGTTG TTGAAGGGGT GATGGAAAAG CTAAAGGCGC TGAAAGCTAC GCTGCCAGAG
GGGACCGAGC TTAACGTTTT TTACAACCGT AAAACGTTGA TTGATACCGC TGTTGGCACC
CTAACCAATG CGCTCACACA AGCTGTACTT ATCGTTATTG TTGTATTGGC TGTGTTTCTT
GGCAATGTGC GCGCGTCTTT CGTGGTTGCG CTGGTTATTC CTGTTGTTGT GCTGCTTACG
TTTCTTGCTA TGAGTATGAC GGGCATTACA GCAAACTTGA TGAGCCTGGG CGGGTTGGTC
ATTGCAATTG GCATGCTGGT AGATGCGTCG GTGGTTGTGG TTGAAAATAC CCTATCGCAG
CTTGGCGCGA ATAAACCGTT ACCTCGCCTT CATTTGGTGT ACCGTGCTAC CCGCGAGGTG
GCGGTACCAG TAATTGCAGG CACCGTTATT GTTATCGTGG TTTTCATGCC CCTTCTAACG
TTAACCGGGC TGGAAGGTAA ACTGTTTTCA CCGGTAGCTA CCACCATTGT TTACGCCATG
ATTGCCTCAC TGGTCACTGC ATTTACCCTT ATTCCGGTGG TTGCTTCGTT TTTACTTTCG
TCCAAAGACG GGGGGGTACC GGGGTATTTG CAATCTCTTC AGTTAGCCTA TCGACGCTCT
TTAACGTTCG TCCTCAATCA CGCTAAATTA ACAGGCATAG TGGCACTTAG TTTACTGGTT
TTAAGCGGTC TTCTGTTCTC GATAACGGGC AAAACCTTCA TGCCGGTTAT GGATGAAGGC
GATATTATTG TGCAATTTGA AAAGTCGCCA ACCATATCAC TCCCATCATC ACTTGAAATA
GACAAACAAA TAGAGCGCAT GCTGTTAGCG TCGTTTCCAG AGATAGAGCA AGTTGTGGCG
CGAACTGGCT CAGACGAATT GGGGCTAGAT CCCATGAGCT TAAATGAAAC CGACGTTTTT
ATGCAGCTTG CACCTTCAGA TACCTGGCGC TTCAGCAATA AGCAAGCGCT GGAAGCGTCC
ATACGAGAAT CGCTTCAGGC ATACCCGGGT ATAAACGTTG GGTTTACGCA GCCTATACAA
ATGCGTGTGT CTGAAATGCT AACCGGCACA ACAGGAATGG TCGCCATCAA AATTTTTGGT
GCTGATATGC AAACACTGTC GGATATTGCG AATAACGTGG CTAACGTTGT GCGAAAGCAA
GAGGGCGCAG TAGACACAAA CGCCACGCTA ATTGAAGGCG GTGACTTTCT TAGCATTATT
CCCAAACCGG GCGTAGCCAT GGAATTTGGA ATGACTAACG CGGCCCTTTC TCGCTACCTG
AAAATGCAGG TTACCGGCAT TCAGGTGGGA GAAGTAATAA AGGGAAGAGT GCGTACACCA
ATCTACTTTG GTGAGTTAGA GCAGGGGCAG GCAGCTATTC TTTCACCAGA TGTACTTAAC
AGCATGATGG TACTTATGCC CTCGGGCCAA GAGCTAATGC TCTCTGATAT CGCAAACATT
ACCCGCACAC AGGGCCCTGC TGTAATTGAA CGAGAGAAAG CTATGCGCTT TGCTGTGGTA
ACCACAAACG TTGAAGGCCG AGATTTGGTG GGGTTTGTTG AATCAACGCA AAAGGCTGTT
GGTTCTAGTG TGTCTTTACC ATCGGGCTAT GCCATAGAGT ACGGCGGCGA ATTTGAAAAC
CAAATACGCG CGACGAATAA CCTGCTTACG GTAATACCCT TGGTTATCGC AGTTATTGTA
CTGATACTGT TTACTATTTT TGGTTCGCTA AAACTGGCTG CACTGGTTAT GGCTAACGTG
CCTTTTGCAG TAATGGGCGG CGTTTACGCA CTGTTTATTA CCGGCGAATA CATTTCAGTT
CCAGCTTCAG TGGGCTTTAT AGCGCTACTA GGTGTGGCAG TGCTTAACGG CGTGGTAATG
GTGTCGCATT ACGAATCATT GAAAAGGCAG TCGTTATCGC TATCTGAGCG CGTAGCAAAC
GGAGCGGTGT CACGTTTACG CCCTATTTTA ATGACCGCAA CCACAGCAAT GTTTGGCTTA
TTACCTTTGG CGTTTGCATC TGGGCCTGGT GCAGAAATTC AAAAGCCGCT AGCGATAGTC
GTCATTGGCG GGTTAATTTC ATCAACGCTT ATCACATTAT ATCTTTTACC TATTGGCTAT
CATTATTTGG AGCGCCGTCA AAATGGATAA
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| Protein sequence | MFVLGAFIGL TAFGINAWLN LPVDAFPDIS PTQVKVIMKA NGMTAEEVEA QITQPIETEL
LGIPHQTILR STTKYAITSI TLDFEQGTDI YWARQQVSAR LASVADLLPA IAEGGLAPMS
TPLSEMFMFT IENPNLSLQE RKHILDWQIR PVLRTVAGVA DVNVLGGFTR TFQFAPDLSR
LVAYGFSLNQ LETALAEANM NGSVGRVRAG ADSLVIRTQS RATSLEELAE LVVGNVDGQP
VRLSDLGTLS LGSLTRYGGV TRNGEETTQA LIVALKDSNT ASVVEGVMEK LKALKATLPE
GTELNVFYNR KTLIDTAVGT LTNALTQAVL IVIVVLAVFL GNVRASFVVA LVIPVVVLLT
FLAMSMTGIT ANLMSLGGLV IAIGMLVDAS VVVVENTLSQ LGANKPLPRL HLVYRATREV
AVPVIAGTVI VIVVFMPLLT LTGLEGKLFS PVATTIVYAM IASLVTAFTL IPVVASFLLS
SKDGGVPGYL QSLQLAYRRS LTFVLNHAKL TGIVALSLLV LSGLLFSITG KTFMPVMDEG
DIIVQFEKSP TISLPSSLEI DKQIERMLLA SFPEIEQVVA RTGSDELGLD PMSLNETDVF
MQLAPSDTWR FSNKQALEAS IRESLQAYPG INVGFTQPIQ MRVSEMLTGT TGMVAIKIFG
ADMQTLSDIA NNVANVVRKQ EGAVDTNATL IEGGDFLSII PKPGVAMEFG MTNAALSRYL
KMQVTGIQVG EVIKGRVRTP IYFGELEQGQ AAILSPDVLN SMMVLMPSGQ ELMLSDIANI
TRTQGPAVIE REKAMRFAVV TTNVEGRDLV GFVESTQKAV GSSVSLPSGY AIEYGGEFEN
QIRATNNLLT VIPLVIAVIV LILFTIFGSL KLAALVMANV PFAVMGGVYA LFITGEYISV
PASVGFIALL GVAVLNGVVM VSHYESLKRQ SLSLSERVAN GAVSRLRPIL MTATTAMFGL
LPLAFASGPG AEIQKPLAIV VIGGLISSTL ITLYLLPIGY HYLERRQNG
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