Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00039 |
Symbol | |
ID | 6777957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 46122 |
End bp | 47576 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642753468 |
Product | DNA repair nucleotidyltransferase/DNA polymerase |
Protein accession | YP_002124353 |
Protein GI | 196154864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000511104 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTGGG CCTATATTCA CTGCTATCAA CTCACTCTTG ATGGCCACAA TCAAGCAACT AACAATAAAA CGTTGAATAG CAAAGTGCCT GGGCAACTTG ATAGCAGCGC AGACTCATCG CTGCCTTTAA GTACACCAGT AGCTGTGTAT AGCAGTAAAG CGAGCAAAAT AATTCAATGT AACGAGGTTG CGAAAAAAGA AGGTATTGAA ATAGGTCATG GGTTAGCTCA AGCGGCTGCG CTGTGCCCTT ATGTACACAT TTTGCCTTTC AATGAAGAAA ATGAAAAACA TATGCTAACT CAGCTGGCGC ATAGGCTTTA TCCGTTGGCG TCTGATATTG TGCTAGACGC TCCTGATGGT TTGGCTATAA GGTTAGATAA TCTCAGTCAC TATTATGGCG GTCATGAGGC ACTCTGGAAA ACATTAACTC AGGCGTTATT TGAGGCCAAT GTTCGTTACC ATTTCGCTAG TGCATGGACA ATAGAAGCCG CCAAAGTACT TGTGCTTCAC AAACACAATA CCTACTTACA TGCGCAACAA GAAATTAAAC AGGCGCTTGG TGCTTGCCCT CTTTCTACCA CGGCGCTTGC GTCAAAAGTT ATAGAATCAC TGACCAGAGT AGGTATTACT CGTGTACATG AGTTACTGGC AATGCCAGTT CAAGAGCTAG GCAAGCGCTT TGACAATAAT ACGATTGTGT ACCTTACCGC ACTTAGGGGG GAGATCTTTC CTCGGGTTAC GCTGTTTAGG CCGCTAGAGC ACTTCGATAA TTTTACGCTG TTACCTTTTG ATATAGAAAA TACACAACAC CTAACCCCTT TTGTGACCCA GCAGTTCGAG CACTTATCGC ACTATTTACG CGCAAGAAAC TTATACACAT CCAGTATAAG TGTGCATATT CATTTTAGAG AAGCACCCGT TTTGGATATT AATATCCGCT CTGCGCTTCC TCAGGCATCC GTTAAAAGCT GGCTACCTTT ATTCACACTT AAAACAGAGA ACCTTGAGTT ACCGGAACCG GCCACCGCCA TTGGCGTTCG GTGCCAACAG TTTGAAGAAA TAGATAGCAA CAATGGCGAC TTTTTTAGCG ATAGATTTAA CGATGTGGCA CAAAAGCAAC TAATTGGTCG CCTAAACGCT AAGTTAGGCG ATCACAGTAC TTTTCAGCCT TGCGCTACCA ATAGCCACCA GTTTGAATAT ATGACGGTGT CAGAACCAAA CGGCAGTGGC TATTCCTACA GCAGTGATAT CACCCCAACC TTCACCTTTG AAGCGCCTAA ACCGCTTATT CAACCATCAC AGATATGCTT CGGACCGGTA CGCCTGCATA GCGAGTGGTG GCGAGATCCC CCTACAAACC GTGACTACTT TATAGCGCAA ACGCCTCAAA GTGTAAGGCT TTTAGTGTTT AAAGATGCGC AAAGTCACTG GTGGGTACAA GGTATTTTTT GTTAG
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Protein sequence | MLWAYIHCYQ LTLDGHNQAT NNKTLNSKVP GQLDSSADSS LPLSTPVAVY SSKASKIIQC NEVAKKEGIE IGHGLAQAAA LCPYVHILPF NEENEKHMLT QLAHRLYPLA SDIVLDAPDG LAIRLDNLSH YYGGHEALWK TLTQALFEAN VRYHFASAWT IEAAKVLVLH KHNTYLHAQQ EIKQALGACP LSTTALASKV IESLTRVGIT RVHELLAMPV QELGKRFDNN TIVYLTALRG EIFPRVTLFR PLEHFDNFTL LPFDIENTQH LTPFVTQQFE HLSHYLRARN LYTSSISVHI HFREAPVLDI NIRSALPQAS VKSWLPLFTL KTENLELPEP ATAIGVRCQQ FEEIDSNNGD FFSDRFNDVA QKQLIGRLNA KLGDHSTFQP CATNSHQFEY MTVSEPNGSG YSYSSDITPT FTFEAPKPLI QPSQICFGPV RLHSEWWRDP PTNRDYFIAQ TPQSVRLLVF KDAQSHWWVQ GIFC
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