| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1367 |
|---|
| Symbol | |
|---|
| ID | 6744192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 1281487 |
|---|
| End bp | 1282116 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642751184 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
|---|
| Protein accession | YP_002122030 |
|---|
| Protein GI | 195953740 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 69 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTTG AAGGATACAT ATTTGATTTG GACGGCACTT TGATAGATTC TTTGGAAGAC
ATAGCAAACG CTGCCAACAA AACACTGAAA GATTTAGGCT TTGAGGAAAA ATCAAAAGAA
GAGATAAAAA AACATATAGG CTCTGGTACA AGGGAGCTTT TTAAAGGAAT TTTAGAGGAT
AAAACCTATT TAGAAAAAGC CATAGAGGTA TTTAAATCTT ACTACGCCCA AGAACCCATC
AAAAACACAA AGCTTTTCGA AGGGGCTTCG GAGGTTTTAA AGCTTTTAAA ATCAAAAAAC
AAGAAGATGG CCGTAGTATC AAACAAACCT TTAGAGCTTA GCAATATAAT ATTAAAAGCT
CTAAACATAG AAAACTATTT CGAATATATA GTAGGTCCAG AAACCTACAA TGAAAGAAAA
CCTTCTCCAG TGCCTATTGC GAGGACTCTG GAAAAAATGT GTATAAACCC AGGAGAGAGT
ATAGTAATAG GAGATACGTA TGTAGATATA GAGAGCGCGA AAAAATCAAA TTGTAAAAGT
GCATTGGCAA GCTGGGGCTA TGTAAAATTG AAAGAAACAA AGCCAGATTT TGTTCTAAAA
AGCTTTGAGG ATTTGGTGTA TATGATTTGA
|
|---|
| Protein sequence | MHFEGYIFDL DGTLIDSLED IANAANKTLK DLGFEEKSKE EIKKHIGSGT RELFKGILED
KTYLEKAIEV FKSYYAQEPI KNTKLFEGAS EVLKLLKSKN KKMAVVSNKP LELSNIILKA
LNIENYFEYI VGPETYNERK PSPVPIARTL EKMCINPGES IVIGDTYVDI ESAKKSNCKS
ALASWGYVKL KETKPDFVLK SFEDLVYMI
|
|---|
| |