| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1316 |
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| Symbol | |
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| ID | 6744135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 1223481 |
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| End bp | 1224317 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642751127 |
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| Product | Linocin_M18 bacteriocin protein |
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| Protein accession | YP_002121979 |
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| Protein GI | 195953689 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00600572 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTTT TGCATAGAGA AGAAAGCCCA CTAACAGCTC AAGAGTGGCA AACAATAGAC
AACATCGTGG TAAATACCGC TAGAAACCAC TTAGTAGGTA GAAGGTTTAT AGAGCTAACC
CAAGCTCTCG ATCCAGCTAT TCAATCGGTG GCCTACGATA CTATACCAAG CTTAGATAAT
GGAGCTTGTG GGCTTTTTGG GGACAAAGAA TGCGGTATAG CCAAAATAAA ATCAAGAAAA
TTTTTACCTA TCCCCCAGAT TTACAAAGAC TTTAAGATAC ACTGGAGAGA CATAGAAACC
AGTAGAAAAT TAAATATACC CTTGGATGTA AGCGTAGTGG CTTTGGCAAC AAGAGAAGTG
GCTTTGGCAG AGGATAGGTT TATATTCCAT GGAGATAGCG AGATTGGGTA TCCTGGGCTT
TTAAATGTAG AAGGAAGAAG TATAATTAAA AACAAAAACT TTGACGAGGA AGGCGGTATA
TTTAAAACAG CTTTAGCTTG CGTGGAAACG CTGGTAGAAA AAGGTTTTAG CAAGAACTTA
GCCTATATTT TAAATCCAAA AGACTATACA AAGGCTTTTA GGATATATGG GAACAGCGGT
GTACTGGAAA TAACGCATAT AAAAGAACTT TTTGATGTAG GAGTTTTCAC AAGCCATGCT
GTTGATGAGG GTAAAACCAT AGCGGTTGCC ACTGGTGTTG AAAATATGGA TATATTTTTA
GTACAAGATA TGATAAGCGC TTTTATAGAT TATGAGAATA TGGATTATTA CTTTAGAGTG
TTTGAGATTT TGGCTTTTAG AATAAAAAAT CCATCAGCGG TAGTCACTAC AGAATAA
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| Protein sequence | MNFLHREESP LTAQEWQTID NIVVNTARNH LVGRRFIELT QALDPAIQSV AYDTIPSLDN
GACGLFGDKE CGIAKIKSRK FLPIPQIYKD FKIHWRDIET SRKLNIPLDV SVVALATREV
ALAEDRFIFH GDSEIGYPGL LNVEGRSIIK NKNFDEEGGI FKTALACVET LVEKGFSKNL
AYILNPKDYT KAFRIYGNSG VLEITHIKEL FDVGVFTSHA VDEGKTIAVA TGVENMDIFL
VQDMISAFID YENMDYYFRV FEILAFRIKN PSAVVTTE
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