Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1243 |
Symbol | |
ID | 6744060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 1152606 |
End bp | 1153382 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642751052 |
Product | Polyprenyl synthetase |
Protein accession | YP_002121906 |
Protein GI | 195953616 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 68 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTTG ATGATTTAAG ACCAAAGATA GAAAAAAGAC TAAGAGAGCT TCTAACGCCT TTTGAGCCAA AGGTTTTGTA CGATGCGATG GCTTATTATG TATTTCAAGA GGGTAAACGC ATAAGACCCG TCTTGTGTGT AATAGGGGGT TATGCTTGTG ATTTAGACGA AGAAGATGCT ATAACCCTTG GGTGCGCTGT AGAGTTTATC CACAACTACT CCCTTATTCA CGATGATATG CCAGAGCTTG ACAACGACGA TGAAAGAAGA GGCAAACCCA CATGCCATAA GATATTTGGT CAAGATATCG CCCTTTTGGC AGGAGATGGT CTTCTTAGCT TAGCTTTTGA TATATTATCA AACGAAAGCC TATATAAAAA TCCCAAAAAC CTCGCTAAGG TGGTAAACTA TGTCTCTAAA AATGCAGGTA TAGAGGGTAT GGTAGCAGGT CAAGTGTATG ATATAAAAGG TGAAAAGGAT TTTCTCAAAG TGGCCTCTTT AAAAACCGCC GCCCTTATAA AAACCTCTTT GGTCATACCA TCGATATTAA AAGGTGTAGA TTTTTCTTTA TACGAAAAGC TTGGACACAA TATAGGCGTA TTATTTCAAC TAACCGATGA TTATTACGAT AAAGACGGGG CATACGTTGT TTTAGGTGAA AAACCTCTTT TAAAACTTAT ACAAGATTAT AAAAATACCA TTTTCACTCT CATAAACCAA ACAAACGTAT CTTCTCATCT TAAAGAGTAT GTAGACTTTA TAAGCTTTGG TATATAG
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Protein sequence | MIFDDLRPKI EKRLRELLTP FEPKVLYDAM AYYVFQEGKR IRPVLCVIGG YACDLDEEDA ITLGCAVEFI HNYSLIHDDM PELDNDDERR GKPTCHKIFG QDIALLAGDG LLSLAFDILS NESLYKNPKN LAKVVNYVSK NAGIEGMVAG QVYDIKGEKD FLKVASLKTA ALIKTSLVIP SILKGVDFSL YEKLGHNIGV LFQLTDDYYD KDGAYVVLGE KPLLKLIQDY KNTIFTLINQ TNVSSHLKEY VDFISFGI
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