| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1164 |
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| Symbol | |
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| ID | 6743981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 1077140 |
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| End bp | 1078534 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642750974 |
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| Product | protease Do |
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| Protein accession | YP_002121828 |
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| Protein GI | 195953538 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0251777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA ATTTTTTCGC TTTGGGTTTA GCTTTATCTA TCCTAGGGTC AAACGTTAGT
GCAGTATCTG GTCCAATTTT AGAGCAATTT CAAAAAGAAG TAGAACAAAT AGTAGATAAA
GTCTCACCTT CAGTAGTAAC AATTTACGCT ACTCAGATAG TGAAAGCTCC TTTAAACACT
CAAATATTTC CAGGATTTCC ACCGTTTATG ATGCCAGGTA TTCCAACTCC AGAAATCCCA
GAGAAAGAAA AAGATTTGGG TTCTGGTATT ATAATTAAAT ACATTCAATC TAAAAATGCC
TTTATAATTT TAACAAACAA TCATGTTGTA GGAAATTCAA AAGATGTAAT GGTAAAATTA
TCTAGAACTA TTGAAAGAAA AGCTAAGGTT TTAGGTAGGG ACCCTAAAAC AGATTTAGCA
GTGCTAGAAG TTAGCGCTGA GGGCATAGAT AACCCTAGTT CTAGAGTGGC TACTCTTGGG
GATTCTTCTC ATGTAAGAAT AGGACAACTT GTCATAGCTA TAGGGAATCC ATACGGTTTT
AGTAGAACTG TTACAATGGG AGTAATATCT GCTTTAAACA GAAGGCTTGG CCTTTCTCAA
TATGAAGATT ATATACAAAC GGATGCTGCT ATAAACCCAG GCAACAGCGG TGGTCCTCTC
ATAAATATAG AAGGCAAAGT GATAGGTATA AATACTGCAA TGGTGAAAGG GGGTCAAGGG
CTTAGTTTTG CCATACCTAT AAATTTAGCT AAATGGGTTT ATCATCAAAT AATGGAGTAT
GGTAAAGTTA TAAGAGGCTG GCTTGGTGTA TCTATACAGC AGATAACACC TCAGATGGCC
TCCTCTTTAG GTGTAAACTA CGGCGCTATC GTCGCTCAAG TATTTCCAGG CTCACCTGCT
CAAAAGTACG GTCTTAAAGT AGGGGATATA ATAGTATCAG TGGATGGAAA ACCCCTTGAA
AGCATAGACG AGCTCCAATT TAAAACCATG GAATCTCCAC CTGGCACTGT CTTGACTTTG
GGTGTTATAA GAAATCATAA GCTTATTACG ATTAAAGTGA AAACTGCAAA AATGCCAAGC
AACACTAGCA ATATAGGTGT TGTATCGGAA GCTAAAGATT TGGGCCTTAT GGTAAGACCT
CTAAATCCTC AAGAGCAAAG ACGTTACGAA GTAAAAGGCG GCCTTTTGGT GGAAGATGTA
CTGATGGGTT CTCCTGCTTA CGAAGCCGGT ATAAGAGCCG GTGATATCAT TCTTAGCATA
AACCTTCATA GAATCTATAC AAAAGCCGAG ATGGACAATA TATTAGAACG CTTAATATCT
GAACATAAAG ATACTGCTAC TTTCCTAGTA GATAGAAACG GTCAAAACAT CTTTGTTACA
GTGAGATTAA AATAA
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| Protein sequence | MKKNFFALGL ALSILGSNVS AVSGPILEQF QKEVEQIVDK VSPSVVTIYA TQIVKAPLNT
QIFPGFPPFM MPGIPTPEIP EKEKDLGSGI IIKYIQSKNA FIILTNNHVV GNSKDVMVKL
SRTIERKAKV LGRDPKTDLA VLEVSAEGID NPSSRVATLG DSSHVRIGQL VIAIGNPYGF
SRTVTMGVIS ALNRRLGLSQ YEDYIQTDAA INPGNSGGPL INIEGKVIGI NTAMVKGGQG
LSFAIPINLA KWVYHQIMEY GKVIRGWLGV SIQQITPQMA SSLGVNYGAI VAQVFPGSPA
QKYGLKVGDI IVSVDGKPLE SIDELQFKTM ESPPGTVLTL GVIRNHKLIT IKVKTAKMPS
NTSNIGVVSE AKDLGLMVRP LNPQEQRRYE VKGGLLVEDV LMGSPAYEAG IRAGDIILSI
NLHRIYTKAE MDNILERLIS EHKDTATFLV DRNGQNIFVT VRLK
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