| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1148 |
|---|
| Symbol | |
|---|
| ID | 6743965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 1060855 |
|---|
| End bp | 1061781 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642750958 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_002121812 |
|---|
| Protein GI | 195953522 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4105] DNA uptake lipoprotein |
|---|
| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ACTTTAAAGT GTTTACTCTT TCTATGGTGA TTTTGGGAGC TTCTTTGATG
GTTAGCTCAT GTGCTAAGGT AACCCAGAAA GAAAGGGAGC AAAGGGCTAT AAACGGATAT
ATCAAAGGCT CGGAAGCTTT TACAAACGGA GATTACTCTT CTGCGGAAGA AAACCTAAAA
AGAGCTTTAA AATACCTTGA AAACCTTACC CCAGAGCAAA TAGAAAGAGC TAGGTTTATG
CTGGCCAAAA GCTATTATCT TGACCATGAT TATACAAATG CCATCATATA CCTTGAAAGC
TTTTTATACT ATTATCCAAA CTCTCCAGAA GCCCCTCAGG CCACATACAT GCTTATAAAA
AGCTATTATA AAATAGCTCC GGACGCTTAC AGAGACCAAA CCTACACTTA CAAAGCTATA
GACTTGGCAA AGGAATTTCT GAGCAAATAC CCAAACAATC CTTACGACTC GGATGTAAGA
GCCCTTATAG ATAAAGCCAG ACAAAAAATA GCAAAACACG ATGAGCTTAT AGCAAAATTT
TACGAAGATT ACGGTTTTTA CTATCCGGCT GCCGAACGCT ACAAAGACAT GCTAATAAAC
GACACGCAGT ATATATCCAA AACAAAAACC TACTACAGGC TAATAAAAAA TCTTTTACTA
GTACCAAAAC AAGCTAAAAG GTATGAAGAT AAGTATAAGG ATATGCTAAA AAAAGATGAA
GACAAGCTTC GTCATGCAAA AGCCCAAGAC AAACCATTTA TAGAAAAACG TATAAAATTC
TGGAAACTTC AGATAAAAAG ATGGGAAGAT TTAGCAAAAA AATCAAGAAA AGAAGGTTTA
GAATACTTTG AAAAGTATAA AAAAATATTT GGCAATACAC CTTACGTATC AAAACTGGAG
AGAATAATAA AAGAAACAAA TGGATAA
|
|---|
| Protein sequence | MKKYFKVFTL SMVILGASLM VSSCAKVTQK EREQRAINGY IKGSEAFTNG DYSSAEENLK
RALKYLENLT PEQIERARFM LAKSYYLDHD YTNAIIYLES FLYYYPNSPE APQATYMLIK
SYYKIAPDAY RDQTYTYKAI DLAKEFLSKY PNNPYDSDVR ALIDKARQKI AKHDELIAKF
YEDYGFYYPA AERYKDMLIN DTQYISKTKT YYRLIKNLLL VPKQAKRYED KYKDMLKKDE
DKLRHAKAQD KPFIEKRIKF WKLQIKRWED LAKKSRKEGL EYFEKYKKIF GNTPYVSKLE
RIIKETNG
|
|---|
| |