Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1033 |
Symbol | |
ID | 6743848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 967714 |
End bp | 968427 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642750841 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002121697 |
Protein GI | 195953407 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGATTG AGGATTTAAC AAATTTTATA AAAGGTGGTA ATGAAGAGAA AATTGTTAAA AAGATAAAAG AAGATGTGCC TTCTTTTGAA GATACGTTAA AATCTGAAAA CTCTAAAAAA ACCGAATCAA AGTTTATTCC CTTTACAAAA GACGGTTTTA TGTCAGACAA TTCCTCTTTG GTGGAAATGT TTAAGTTTTT TGATATTGTT GACACTACCC AAGATCCTCC TACAGACAAT GAAAACCATA ACAACTTAAC AAATCTTATC ACAGATAACA CAAAAGAAGC TATAGAATAT AGTTTTGATA GCTTGCCAAA AGACCTAAAA AATCAAATAG GACAAGCCGC AGATAAAGCT TCTTTCAAAT ACCATATTCC CAAAGAACTT ATATATGCTA TTATAGATCA AGAATCTTCT TTTAATCCTT ATTCTGTAAA TCACAACAAA GATGGTACCA CAGATAGGGG ACTAATGCAG GTAAACTACG ATCACAATAT AGATATAATG AAAGAGCTAA ATATAAAAGA TAAAAACCAA CTGTTTGATA TAGACACCAA TATAGAAGCT GGCACAGCCA TACTGGCTAG AGATTTTCAA AAGTATGGAA ATTGGCCTAC CGCTATAAAA GCTTACAATG GTATAAACTC AGATAACTGG GGCTATGTCA AATCTGTGTT GTCAAAAATT AAGAAATACC AAAACGTTAC ATAA
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Protein sequence | MRIEDLTNFI KGGNEEKIVK KIKEDVPSFE DTLKSENSKK TESKFIPFTK DGFMSDNSSL VEMFKFFDIV DTTQDPPTDN ENHNNLTNLI TDNTKEAIEY SFDSLPKDLK NQIGQAADKA SFKYHIPKEL IYAIIDQESS FNPYSVNHNK DGTTDRGLMQ VNYDHNIDIM KELNIKDKNQ LFDIDTNIEA GTAILARDFQ KYGNWPTAIK AYNGINSDNW GYVKSVLSKI KKYQNVT
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