| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1027 |
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| Symbol | |
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| ID | 6743842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 961270 |
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| End bp | 963597 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642750835 |
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| Product | DNA topoisomerase type IA central domain protein |
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| Protein accession | YP_002121691 |
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| Protein GI | 195953401 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAC TTATATTGGC TGAAAAACCA TCTGTGGCAA GAGATATAGC TTCGGCTTTA
TGTAAAAGCC TAAACAAAGA CGCTTCAAAG AAAGGGTATT TTGAATGTGA AGAAAAAAAC
CTATATATCA CTTGGGCTAT AGGGCATTTG GTAGAAATAG ACGATGAGAT AGCCCCAAGA
AAGTGGAGCT TAGAAACGCT TCCAATACTG CCAGAGACTT TCAAATATAA AGTTATAGAT
AAAACTTCGA ATCAGTTTAA AGTAATATCT AAGCTTTTAA AAGAAGTAGA CGAAGTGGTG
ATCGCCACAG ATGCTGGAAG AGAAGGTGAG TTGATAGCAA GGCTTATTTT GATGTTAAAC
CACTTTAAAG GCTCTGTAAA AAGATTTTGG ACATCCGATG CTCTTACAAA AGAAGTGATT
ATAAGGGAGA TGGAAAATTT AAAAGATGCT TCTTTGTTTG ATAGTTTATA TTATTCTGCT
TTAGCTCGTT CACATGCCGA TTGGATAGTG GGTATAAATC TTACAAGGCT TATGACGGTA
AAAGCAGGAG GTGGTGTATG GTCTGTAGGT AGGGTACAAA CTCCTACTCT TAAGCTTATA
GTTGATAGGT ACAAAGAGTT TAAGGATTTT ATACCAAAAG AATACTATGT AATAAAAGCT
GTGTTTAGTG CTTGTGATGA TTGTATAGAT ACTATATCTA AATCTTATGT AGGGCTTTTG
GTATTAGACA AAGCTCAAGA AAAAACGTAT AAGACGTTAA AAGATGCTTT GGAAGAGGAA
GAGTCAGAAA AGACTGCAGG TGCTCCAAAG TCCAAATATT TTACACCGCT TTTAAAAGAA
TCAAAAAATC AAATAATGGA AAAACTGGAA AAAGTTAAAG AAGGTATTGT AAAAGATGTA
AAAATCACTA AAAGAAAGGA AAACCCACCG CTTTTACACT CTTTGACGTC TTTGCAAAGA
GAAGCCAACA GAATATATGG ATACTCTTCC ATGAGAACGT TAAATATAGC TCAGAAGCTT
TACGAATCTT ACAAGTGTTT ATCTTATCCA AGAACGGACT CAAACTACCT TGGAGAGGAT
CAAGAAACCA AAAATCTTGT TAAGAACCTT TTAAAAAAGT TAGTTGATAA AAATATTTAT
GAGTTTTTAT CAAAAAATAT AAACAAAGTT GGCAAGAGGG TATTTGATAG TTCAAAACTT
ACAGACCACC ACGCTTTAAT TCCTTTTGGA CCTATACCGG AAGATGCTTC TAATGAAGAG
AAAAATATAT ACAACCTCGT TTTTAGACGA TTTGTAGGTG CTTTTATGGA ACCTTACGAA
TATGCCATTA TTACTATAAA AACGATGTTA GGAGAATTTA CTTTTATATC AAATATAAAC
ATAGAAACGT TGACAGAGGA AGAGTATCAA AAGACTTACC TTTCTTTATA TAGACCTTAC
AAGCTTGAAA TTAAAGAATC TTTGTCTGAA GATGAGGATA TAGAACCTAA TAATATAGAG
CGATATCAGC GTGTTTCGGA GCTAAGGAAC AGGCGCAGCC ACCAAGGAGA AGAGAGAAAT
GCTTACAGCA CACTAGATTT TGATTATATT AAAAGCCTGA AACCAGATGA TAAAGTTTAT
AAGAGATCTT TAGAAGCTTT ACAAAAGTTT ACCAAGCCAC CAGCTCTTTA CACAGAAGGT
ACACTCCTCA AAGTTATGGA AAAGCTAGGC CTTGGTACAC CAGCTACGAG GGCTTCTATA
ATAGAGACGC TTTTAGAAAG AAAATACATA TCAAGGGTAG ATAAATCTTT ACTACCTACG
CTAAAAGGAG AGGAGCTTAT AAAATCTCTA AGAGATAGCG ATGTATCCAA GCCAGAGATG
ACCACAACAT GGGAAGAAGA GCTTGAACGA ATATACAAAG AAAGAAAATC AAAAGAGGGT
TATATAAGGT TTATGCACAA TATAAAAGAA TTTGTATCAG ACAACATAGA TAGACTTAAG
TTTGTAGAAA TGAAAAGAGT GCCGATGGCT ACAAAGAAGA TGATAGAGTT TGCAAGATCT
TTGGCAAGGG CAAAAAATAT AAAACCACCT CATTCTACGG ATTATGAAAC TATAAAAGCT
TTTATAGAAG AGCATAATCC TAAAAAAGAG GGAAATACCG AAGAAAACAC AAATGGATAT
ACACCCCCCA CAGAAAAGCA AATTGCTTTT GCCAAATCTT TGGCCCAGAA ATTAAACCAA
GAAATACCAG AAGACGCTTA CGTTTCTACG AAAACGATGT CAGAGTGGAT AAAAAACGCC
ATAAAACAAA CCGGGTATAA AAAATCCTAC AGAAGGGGCA AAAAATGA
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| Protein sequence | MKRLILAEKP SVARDIASAL CKSLNKDASK KGYFECEEKN LYITWAIGHL VEIDDEIAPR
KWSLETLPIL PETFKYKVID KTSNQFKVIS KLLKEVDEVV IATDAGREGE LIARLILMLN
HFKGSVKRFW TSDALTKEVI IREMENLKDA SLFDSLYYSA LARSHADWIV GINLTRLMTV
KAGGGVWSVG RVQTPTLKLI VDRYKEFKDF IPKEYYVIKA VFSACDDCID TISKSYVGLL
VLDKAQEKTY KTLKDALEEE ESEKTAGAPK SKYFTPLLKE SKNQIMEKLE KVKEGIVKDV
KITKRKENPP LLHSLTSLQR EANRIYGYSS MRTLNIAQKL YESYKCLSYP RTDSNYLGED
QETKNLVKNL LKKLVDKNIY EFLSKNINKV GKRVFDSSKL TDHHALIPFG PIPEDASNEE
KNIYNLVFRR FVGAFMEPYE YAIITIKTML GEFTFISNIN IETLTEEEYQ KTYLSLYRPY
KLEIKESLSE DEDIEPNNIE RYQRVSELRN RRSHQGEERN AYSTLDFDYI KSLKPDDKVY
KRSLEALQKF TKPPALYTEG TLLKVMEKLG LGTPATRASI IETLLERKYI SRVDKSLLPT
LKGEELIKSL RDSDVSKPEM TTTWEEELER IYKERKSKEG YIRFMHNIKE FVSDNIDRLK
FVEMKRVPMA TKKMIEFARS LARAKNIKPP HSTDYETIKA FIEEHNPKKE GNTEENTNGY
TPPTEKQIAF AKSLAQKLNQ EIPEDAYVST KTMSEWIKNA IKQTGYKKSY RRGKK
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