| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0888 |
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| Symbol | |
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| ID | 6743700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 836222 |
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| End bp | 836899 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642750694 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_002121553 |
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| Protein GI | 195953263 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAAAAA CCGACATACC TAAAGTGTTT AAGATTTTAA AAAAAGATTA TGAAGAAAAC
CATGCACCGG TTGTTACCCT TATAGCTCAT ACCACAAAAG ACCCTTTTAG GGTGCTTGTA
TGCGCCCTTC TTTCCACCAG AACAAAGGAT GAGACTACCG CAAGGGTTTG TGAAAGACTT
TTTGTTAAGG TAAAATCTAT AGAGGATTTG TACAACATCA AAGAAGAAGA GTTAAAGGAG
CTTATATACG GCGTTGGATT TTACAACACA AAAGCAAAAA ACTTAAAAGA GCTTTCAAAG
ATTTTGGTAG AAAAATATAG CGCTAAGATA CCAAATACGT TGGAAGAGCT TCTTGAACTT
CCTGGTGTAG GGCTTAAGGT AGCGAATTTG GTATTGGCAG AAGGGTTTGG CATACCAGCC
ATCTGTGTAG ATGTGCATGT GCATCGTATT ACCAACAGAT GGTGCTTAGT AAAAACAAAA
ACCCCAGAAC AAACAGAAGA GGCGCTAAAA AACATACTAC CTAAAAAATA TTGGATTGAT
ATAAATAGAT ATTTGGTATC CTTTGGTCAG CGTATATGTA AACCCATAAA ACCAAGCTGC
AACATATGTC CTATCGAGCG CTTTTGCGGA AAATGTATTG ATAAAAAGAA CCGATCAAAA
CAACAAAAAG ATTTATAG
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| Protein sequence | MKKTDIPKVF KILKKDYEEN HAPVVTLIAH TTKDPFRVLV CALLSTRTKD ETTARVCERL
FVKVKSIEDL YNIKEEELKE LIYGVGFYNT KAKNLKELSK ILVEKYSAKI PNTLEELLEL
PGVGLKVANL VLAEGFGIPA ICVDVHVHRI TNRWCLVKTK TPEQTEEALK NILPKKYWID
INRYLVSFGQ RICKPIKPSC NICPIERFCG KCIDKKNRSK QQKDL
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