| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0725 |
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| Symbol | |
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| ID | 6743529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 660924 |
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| End bp | 662390 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642750524 |
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| Product | Type II secretory pathway component PulD-like |
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| Protein accession | YP_002121390 |
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| Protein GI | 195953100 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0680594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG TTCTTGCTTT TATAGGCATA TTACTTTTTG TATCTATCTC TTATTCTTAC
CATCTTATCG GAAACTACAA AGTTACGCCT AAAAATAAAA TAAGCACACC ACCAGGTTTT
ATAATAAACG GTCAAAACGC TTTTTTGCTA AAACCTGTTA CCTTAAATGT AAAAGATGTT
CCAATACCAC AAGTATTATC TTATCTTTCA GGCATAACCC AAGTGCCTAT AGAACTAAAA
GATAACGTAC AAGATAGGGT TAGTTTTTAT GGACAAGGCA CTTTAAAAAG TATATTAGAC
ACCTTTTGTG CTTATAACAA TTTATATTAC AAGGTTAAAA ACGGGAAAAT AATAGTAAGA
AGGTATATAA GTGCTGTGTT TCAGCTGAAT GTGCCGATGA CTACCACAAA AGCATACAAT
TACAATATGA CATTTGGTCA AAGTGTTACC AATAGCTCCT CTGGCGGTGG TATGCTAGGC
GGTACTACCG TAAACCCTAT ACAAAACACA GGTACAAACA GCTCTAGTTC AACTTTTAAT
TTCAACGAAA ATTTAGCTCA AAACATTGTG AATCTTATAA CACCACTTCT ACAAGACAAA
CGCTCCAAGA TATCTTACGA TCCAAACACA GGCCTTCTTA CATTCTTTGG CTCTATAAAC
GATTATAAAA CTGTAAAATC TATAGTAAAT AAGTTAAACA AAGAACTATC AGAACCTATA
AAAATAAGAA TAAATATAAT AGCTATAAAC CTTTTAAACG AATACTCTAC TGGTATCAAT
CTTTCAGCTC TATTTCAACA TTTAAAAAAC TTAAATCTGT CTTTAACCGC TCCTATAACA
CTTACAAATC CATCAAACTC TTTGTTTAAT GCAGGTTTAA GCGGTAGTAA TTATGATGCT
CTTTTAAACG CTCTAGAACA ATACGGTAAA ACAAAAAGCA TAGATAGTGA AACCTACACC
GTGTTACCAA ATCAGCCTAT TGTTTATGCT CCTACCAATA CTCAATCTTA TATAAGCTCA
TACAATATAT ATATTCCTCC AACTGTAGCC GGAGTAGTGT CTACTCCAGC TTACATACCA
ATAGTTTCTT ATCTAAACAC AGGGACAAGT ATTACCATAC TACCAAGACT TGCAAACAAC
AAAAAACTTA TGGTGGATGT CTACTACTCT CAAAATACAC CTCAGAACCT AAACACTCAA
AATATAACAA TAAGTCAAGG AGTAACTGTC CCTATACAAT TTCCTGAAGT TTCGTCTCAA
AACTCTGTTT TAACATCTGT TTTAAAACCA GGACAAACCA TAGCCCTTAT AAGCTCTGTA
TATGACCTTA AGAAAAACAA CGAAGCTGGT ATACCGTTTT TAATAAGAAT ACCTCTTATA
AAATACCTTT TTGGCAACAC CGATAAATAT TCAAATAAGG TGCAGTTTAT TATAACAATA
ACCTACGAGG GTTTGGGTGA AAAATGA
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| Protein sequence | MKKVLAFIGI LLFVSISYSY HLIGNYKVTP KNKISTPPGF IINGQNAFLL KPVTLNVKDV
PIPQVLSYLS GITQVPIELK DNVQDRVSFY GQGTLKSILD TFCAYNNLYY KVKNGKIIVR
RYISAVFQLN VPMTTTKAYN YNMTFGQSVT NSSSGGGMLG GTTVNPIQNT GTNSSSSTFN
FNENLAQNIV NLITPLLQDK RSKISYDPNT GLLTFFGSIN DYKTVKSIVN KLNKELSEPI
KIRINIIAIN LLNEYSTGIN LSALFQHLKN LNLSLTAPIT LTNPSNSLFN AGLSGSNYDA
LLNALEQYGK TKSIDSETYT VLPNQPIVYA PTNTQSYISS YNIYIPPTVA GVVSTPAYIP
IVSYLNTGTS ITILPRLANN KKLMVDVYYS QNTPQNLNTQ NITISQGVTV PIQFPEVSSQ
NSVLTSVLKP GQTIALISSV YDLKKNNEAG IPFLIRIPLI KYLFGNTDKY SNKVQFIITI
TYEGLGEK
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