| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0686 |
|---|
| Symbol | |
|---|
| ID | 6743488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 615598 |
|---|
| End bp | 617295 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642750483 |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_002121351 |
|---|
| Protein GI | 195953061 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0442] Prolyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.690918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATGGA GTAGATATTT TTTATACACC ACAAAAGAAG AACCCTCTGA AACAGAGGCA
GCTTCTCATA GATTTCTTAC AAAAGCAGGT TTTATAAAGC AAGTGGCTTC TGGTATATAC
GAGCTTACAC CCATAGCCTT TAGAGTGCTT AAGAAAATAG AAAATATAGT AAGAGATGAG
ATGGATAAAG CTGGGGCTCA GGAGCTACTA CTTACTATAT TAAATCCAGC GGAGCTTTGG
AAAGAAACCG GAAGATGGGA TTATTACGGC AACGAACTTT TTAAGCTAAA AGATAGATCC
GATAGAGATT ACTGTCTTGG TCCTACCCAT GAAGAGGAGA TTACAGATTT GGTAAGAAAA
ACCGTAAGAT CTTACAAACA ACTTCCTTTA AACCTATATC AGATACATAC AAAGTTTAGA
GATGAGAAAA GACCTCGTTA TGGGCTTATA AGAGGAAGAG AATTTATTAT GAAAGATGCA
TATTCTTTTG ATACAGACGA AGAAAGTGCC AAGAACTCTT ACGATATCAT GGTAAAAGCA
TACAAAAACA TCTTTAAAAG ACTAAATTTA AATATATTGA TGGTAAAAGC TGATGTTGGT
CAAATAGGTG GAAAAAGCTC TCATGAGTTT GTGGCTATTA CAAAATATGG CGAAGCGCTG
ATAGCTTATT GTGAAAACTG TGGCTATGCG GCCAACACCG AGATAGTGGA ATTAAAAAAA
CCAAACGTAG AAAAAGAACC ACCGTTAGTT TTAGAAGAGG TATATACTCC AAACATTAAA
ACCATCGAAG AACTCTCTTC ATTTTTAAAT GTAGCTAAAA GCAAAATTAT AAAATCTGTG
CTTTATATAA AAGAAGATAA ACCTATTATG GTGCTTATAA GAGGGGATAA GAAGATAGAT
GAGAAAAAAC TTGAAAGACT TTTTGGTACA GATGAGTTTA GATTAGCAGA AGATGATGAG
GTTTTGAGGC TTTTAAATAC CGAAAAAGGT TTTATAGGTC CTTTTGTGGA AGGTAAAGAT
ATAGAGATAA TAGTGGATAA CTCTTTATAC AACGCTTCAA ATATGGTAGT GGCCTTCAAC
AAGCCTCATT ATCATTATAA AAATGCAAAT ATTGATTTTG AAAACTTTGT AGATGTAGCC
CAAGTAGAAG AAAATGACCC TTGCCCAGAA TGTGGCAGTC CTTTGAAGGT GGCTCAAGGA
TTGGAGCTTG GACATACATT TTTACTTGGT ACCAGATACT CTTTGCCTAT GAAGGCGTTT
TTTACAGATA AAGACGGTGT AGAAAAACCT GTTGTAATGG GATGTTATGG TATAGGTATA
TCAAGGCTTA TAGCAGCTTT GGTAGAACAG TATCACGATG AAAAGGGTAT AAAGTGGCCG
TTGCCTGTGG CTCCATTTCA AGTGCTTATT AGTTGTGTAA ATACTTCAGA CGATATTCAA
TATAGCACAT CAGAGCATCT TTATAAAAGC CTAACACAAG AGGGTATAGA AGTGCTTTTT
GACGATAGGG ATGTATCACC TGGAGTTAAG TTTAACGATG CAGATTTAAT AGGTATACCT
TATAGGATAG TAGTGGGTAA AAAGGCAAAA GATGGTCTTG TGGAAGTGGT AGATAGGCAT
ACTTTAAAAG CCGTTGATGT TCCAATAGAT AAGGTATTAG ATTACATAAA GGATATTTTG
AATGTAAATG GCAGGTGA
|
|---|
| Protein sequence | MRWSRYFLYT TKEEPSETEA ASHRFLTKAG FIKQVASGIY ELTPIAFRVL KKIENIVRDE
MDKAGAQELL LTILNPAELW KETGRWDYYG NELFKLKDRS DRDYCLGPTH EEEITDLVRK
TVRSYKQLPL NLYQIHTKFR DEKRPRYGLI RGREFIMKDA YSFDTDEESA KNSYDIMVKA
YKNIFKRLNL NILMVKADVG QIGGKSSHEF VAITKYGEAL IAYCENCGYA ANTEIVELKK
PNVEKEPPLV LEEVYTPNIK TIEELSSFLN VAKSKIIKSV LYIKEDKPIM VLIRGDKKID
EKKLERLFGT DEFRLAEDDE VLRLLNTEKG FIGPFVEGKD IEIIVDNSLY NASNMVVAFN
KPHYHYKNAN IDFENFVDVA QVEENDPCPE CGSPLKVAQG LELGHTFLLG TRYSLPMKAF
FTDKDGVEKP VVMGCYGIGI SRLIAALVEQ YHDEKGIKWP LPVAPFQVLI SCVNTSDDIQ
YSTSEHLYKS LTQEGIEVLF DDRDVSPGVK FNDADLIGIP YRIVVGKKAK DGLVEVVDRH
TLKAVDVPID KVLDYIKDIL NVNGR
|
|---|
| |