| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0640 |
|---|
| Symbol | |
|---|
| ID | 6743440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 574617 |
|---|
| End bp | 575303 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642750435 |
|---|
| Product | Uroporphyrinogen III synthase HEM4 |
|---|
| Protein accession | YP_002121305 |
|---|
| Protein GI | 195953015 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAGC TGCTTCTCAC AAGAGAAGAA GAGAAAAACT TAGAATCTAA AAAAATATTC
TCTTCTTACA ATATAAATAC TATCAGCTTA CCTATGATAG AAACAATACC CAAAGAGTTT
GAGTTAAAAG ACTTTGACTT TGATTGTATA ATCTTTAGCA GCAGAAAAGC TGTAGAAATA
TTTTTTAAAA ATTTACATAT TTGCAAAAAT GCAAAAATTA ATGTATATAT TGTAGGAGAA
AAAACTAAAG AGTATTTCTT GGGATTTTAC AACACAAAAA ACTTAATTGC TAGAGATTCA
ATAAAAGAAA TACTACCTAT AGTAAACTGT AAAACTCTTT GGATAAGGAC AGACTTCGAG
CTTCCAGAAG ATATAAAAAA TATGGTAAAA AACAAAGATA TTTTCATATT AGAAGCCTAC
AAAACTAAGC ATAAGATTTA CGAATTAAGA AAAGTACTAG AGACTCTTAA GGCAGTAAAT
GGAGTATTTT TTGCTAGTCC TTCAGCTTTT TTAGGGCTTT TAAAAAATTT GCAAAATTAC
AAATATATTT TAAACGAAAA AGACATATTT GCTATAGGAA ACACTACGGC AGATGCTATA
AAAAATGAAG GATTTCAAGT GACTTACGTC CCCCAGAAAC CAAGCGTAGA ATCTATAGCA
AAATATATAT CATCTATTGG CACATAA
|
|---|
| Protein sequence | MYKLLLTREE EKNLESKKIF SSYNINTISL PMIETIPKEF ELKDFDFDCI IFSSRKAVEI
FFKNLHICKN AKINVYIVGE KTKEYFLGFY NTKNLIARDS IKEILPIVNC KTLWIRTDFE
LPEDIKNMVK NKDIFILEAY KTKHKIYELR KVLETLKAVN GVFFASPSAF LGLLKNLQNY
KYILNEKDIF AIGNTTADAI KNEGFQVTYV PQKPSVESIA KYISSIGT
|
|---|
| |