| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0573 |
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| Symbol | |
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| ID | 6743369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 513281 |
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| End bp | 514450 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642750364 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002121238 |
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| Protein GI | 195952948 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000216198 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCTA AAGCAGTTGG TATTGTTATA GCTATTCTTG TAATAGTTTT GGCTATTTAC
GCTTTTATAA AAAGAAAAGA GTATATAGAA AATGAAAAAG CGGCAAAGGC ATATCCTATC
GTATTAAAAA CGGCAACGAC ACAAGAGGGA ACAATAGCTG ATAAAGAAAC ATTTTTGGGT
AGATTTGAAC CCAAAAACGA GGCAAGTATA GCATCGAGGG TGAGCGCTTA TATCCTCTAT
GTGGCTAAAG AAGGCACAAA AGTTAAAAAA GGAGATTTGT TGGTAAAATT AGACAACTCA
AATATAGTTT CTAATATAAA CGCTTTGAGA AATAACCAAG CATCTATAGC TTTTCAACAA
GAGGCTTTAA AAAGAAACCT AAGAGCTTTA AAAACCAAAT ACCAAAACCA AAAAAAGATA
TATGAAAGAG ACACGGTGCT TTATCATCAC GATGCTATAT CAGAAGAGGC TTTTGAAAAA
TCCCAAGACT TGTATCAAGA GGCAAAGTCC CAATATGAGG CTACTATAAA TCAAATAGAA
GGGCTCTCAC AGACGATGAT GGGCATTGGC AATCAAATAA AGGGTTTAGA AGATGATCTA
AAGTATACAA CCATTGTAGC TCCTTTTGAT GGTGTGGTAT CAAAGCGCTA TTTAAAAGAA
GGAAATTTAG CGATCCCCGG AAAACCAATC ATTGATTTGG AAGGCACCGA TGGTAAGTAT
GAGGTTTATG TGGATGTGCC ACAAGACTTT GTAAATTATG TAAAAGTAGG TGATGTAGAA
ACCATAAAAC TAAATGGAAA AACTCAAAAT GCCACAGTAG AAACCATCAT ACCAAAAGCC
CAAAACAATA TGATAAGCAT AAAACTATAT TTAGACAAAA ACACCATAGG TGCAATCCCA
GATATGTATA TAAAAACAGA GCTTACAAAA GGTCAGTGTA GCGCTGCTCT TATACCAAAA
AATGCAGTAA ATCATACATC AAAAGGCTAT TATGCTCTTG AGATAATAAA CAACAAAGTC
CATTGGGCAG CTTTTACACC CATTGCAAGA AACGACGAGT ATTTTTGTAC AAAAGATATA
CCTCCAAATG TAAGACTTGG TATAGCAAAT AGATCTGAGA TGCTATCTAT CCAAGAAGGA
CAAAAGGTTC TAACAGAGGG CTCAAAATGA
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| Protein sequence | MKAKAVGIVI AILVIVLAIY AFIKRKEYIE NEKAAKAYPI VLKTATTQEG TIADKETFLG
RFEPKNEASI ASRVSAYILY VAKEGTKVKK GDLLVKLDNS NIVSNINALR NNQASIAFQQ
EALKRNLRAL KTKYQNQKKI YERDTVLYHH DAISEEAFEK SQDLYQEAKS QYEATINQIE
GLSQTMMGIG NQIKGLEDDL KYTTIVAPFD GVVSKRYLKE GNLAIPGKPI IDLEGTDGKY
EVYVDVPQDF VNYVKVGDVE TIKLNGKTQN ATVETIIPKA QNNMISIKLY LDKNTIGAIP
DMYIKTELTK GQCSAALIPK NAVNHTSKGY YALEIINNKV HWAAFTPIAR NDEYFCTKDI
PPNVRLGIAN RSEMLSIQEG QKVLTEGSK
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