Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0492 |
Symbol | |
ID | 6743286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 433555 |
End bp | 434049 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642750282 |
Product | peptide deformylase |
Protein accession | YP_002121157 |
Protein GI | 195952867 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATATACG AAATCCTTGT TTATCCAAAT CCTTTACTCA AAGAAAAATC AAAAGATGTT AATAAAATAG ACGACAATAT TATTAAACAT ATAGAAAACC TTAAAGAAAC TATGTATTCA AAAGATTTTT GTACCGGTAT AGCCTCTTCT CAAGTGGGTG TCTTACAAAA TATAGTAGTA ATGGACGCTT CCCGCTTTAG AAAACCGCCT AAAAACCACC ATGGCCTTAT CACACTTATC AACCCTGTCA TAATAAAATC TGAAGACAGC ATAATTTTTA GAGAAGGGTG TCTTAGCGTA CCAGAATATA CCGCCAACAT CCAAAGGTAT AAACACGTAT CTGTAAAAGC CTTAGACGAA AAAGAAAATG AAATAATACT AGATTTAGAA GGTCCAGAAG CTGTTTTATT TCAACATGAG CTAGACCATT TAAACGGTAT ATTGTTCCTT GATAGACTCA CATCTTTAGA TAATCTTTTT AAAAGAAAAA CCTAA
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Protein sequence | MIYEILVYPN PLLKEKSKDV NKIDDNIIKH IENLKETMYS KDFCTGIASS QVGVLQNIVV MDASRFRKPP KNHHGLITLI NPVIIKSEDS IIFREGCLSV PEYTANIQRY KHVSVKALDE KENEIILDLE GPEAVLFQHE LDHLNGILFL DRLTSLDNLF KRKT
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