Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0316 |
Symbol | |
ID | 6743110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 275320 |
End bp | 276654 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642750109 |
Product | MATE efflux family protein |
Protein accession | YP_002120984 |
Protein GI | 195952694 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000262265 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAGCAA ACCTTATTGT TGATGAGTCT AAAAAATCAA GAGATATATT AAAGGCGGTG CTTAATGTCG CCACACCGGT AATTATCTCA AATTTACTTT ACACCGTTGA AACGCTTGTA TCGCTTCTTT TGGTGTCTCA TCTTGGTAAA AGCGCTATAG CCGGTGTTGG TTATTCGATA TCCATGATGT GGTTTGTTTA TTCTTTGATG GCTCTAACTT ACAACGGTAC ATCTATTATG GTGTCCCACA GAGTAGGAGC TGGTAAGCCG TTTTTTGATG TATTTTTAAG CGGTATGGTT TTATCGCTTT TATTATCAAT ACCAATTGCT CTTTTTGGCA CAAAGTTTAT ACCAGAGCTT ATGCTTTTGT TTGGGGCTAA AAAAGACATA GCAAACATAG CCACGATATA CTTAAAACCC ATATTTTTAG CGGCTTTTAT ACAGTTTGCC ACAGAGGTGT TTTACGCTAC ATACAGCGGT ATGGGTCAAA CAAAATTTCC CTTTAAAGTA TCTGTAATTA TGAATATAAC CAATATAGCA AGCTCTTATG TCCTTATAAA CGGCAAGCTT GGTTTTAAGG CTTTTGGCAT AGAAGGTGCT GCTTTTGGTA TTGTGATATC TGAAGTGGTT GGATTTTTTA TTTACGCTTA TGTGCTCTTT GTTAATAAAC CTTTTGGTAA ACTTTCTTTT AAAAGCCTAA AAACTATTTT AGAGATGTTA AAACTTGGGA TACCTGTTAC AGTAGATAGG GGTCTTACAA GTTTGTCCTT CAATCTTTTT GTAGGGTTTG TAGCAAGATT TGGCAATACC ATTTTGGCAG CCTATCAAAT AGGCCTTAGA TTAGAAAGCA TATCTTTTAT GATAGGTTAT GCTTTAAGTA TATCGGCAAG TGTATTGACT GGACAAAATT TTGGCGCTGG CAACATAAAA GGAGCTTTTA GAGGAGCTAA GGTAATTGCA AATTTTAGTG CTTTGGCAAT GGGTATAGTT GGTCTTATGG TGATTATTTT ATCAAAATAT ATGGCTATGA TATTTACAAG CGATAAAAAC ATAATACACT ATGCCGAAAT ATATCTTATT ATGGTAGGTT TAACACAGGT GTTTTTGTCT TATAGCTTTG TTTTATCTGG GGCTATAAAA GGCTTAGGCA AAACTTACAT ACCTATGATT GTCAATATAG TATCGTTTTG GGTTTTTAGA ATAATACCTA TAGTTGTTAT GTTAAAATAT ATCTTTAATC CATTCGTACC TTGGGTGTTT ATGAGTGTTG AAACCGTAGC AAGGGCTATT TGTTTTTTGG TAGTATTTAA ATATTTGGAG AAAAACTATG GATAA
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Protein sequence | MEANLIVDES KKSRDILKAV LNVATPVIIS NLLYTVETLV SLLLVSHLGK SAIAGVGYSI SMMWFVYSLM ALTYNGTSIM VSHRVGAGKP FFDVFLSGMV LSLLLSIPIA LFGTKFIPEL MLLFGAKKDI ANIATIYLKP IFLAAFIQFA TEVFYATYSG MGQTKFPFKV SVIMNITNIA SSYVLINGKL GFKAFGIEGA AFGIVISEVV GFFIYAYVLF VNKPFGKLSF KSLKTILEML KLGIPVTVDR GLTSLSFNLF VGFVARFGNT ILAAYQIGLR LESISFMIGY ALSISASVLT GQNFGAGNIK GAFRGAKVIA NFSALAMGIV GLMVIILSKY MAMIFTSDKN IIHYAEIYLI MVGLTQVFLS YSFVLSGAIK GLGKTYIPMI VNIVSFWVFR IIPIVVMLKY IFNPFVPWVF MSVETVARAI CFLVVFKYLE KNYG
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