| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0277 |
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| Symbol | rplE |
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| ID | 6743071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 246572 |
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| End bp | 247135 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642750070 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_002120945 |
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| Protein GI | 195952655 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000000356643 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTACAG ATGTGAAGCA AAAACAAAGA TTGCAAGAGA GATTTGAAAA AGTTGTGGTA
CCTAGATTGA TGGAAAAGTT TAATTATAAA AGCCCGATGG AAGTTCCAAG GATAATAAAG
ATAGTGGTAA ATATGGGTGT AGGAGAAGCT ATAAGCGATA TAAAAAATCT AGATAGAGCT
ATGGAAGATT TAAAGCTTAT AACTGGCCAA TATCCTTCTG TTAGAAAAGC TAAAAAATCA
GAGGCTTCTT TTAAGTTAAG AAAAGGACTT CCAATAGGCT TAAAGGTTAC TTTAAGAAAG
GATAGAATGT GGAACTTTTT AGATAAGTTA ATATCTGTAG CGTTGCCTCG TGTGAAAGAT
TTTAAAGGTT TAAATCCTAG GTCTTTCGAT GGTAGAGGAA ATTATGCTTT TGGTTTATCA
GAGCAAATAG TGTTTCCAGA GATAGATTAT GAAAAAGTAG ACGCCATAAG AGGTATGGAT
ATTCTTATTA ATACAAGCGC AAAAACTGAT GAGGAAGCCT TGTATTTGTT AGCTTTGCTT
GGATTGCCCA TAAGAGCTTA TTAA
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| Protein sequence | MSTDVKQKQR LQERFEKVVV PRLMEKFNYK SPMEVPRIIK IVVNMGVGEA ISDIKNLDRA
MEDLKLITGQ YPSVRKAKKS EASFKLRKGL PIGLKVTLRK DRMWNFLDKL ISVALPRVKD
FKGLNPRSFD GRGNYAFGLS EQIVFPEIDY EKVDAIRGMD ILINTSAKTD EEALYLLALL
GLPIRAY
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