| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0245 |
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| Symbol | |
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| ID | 6743035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 218271 |
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| End bp | 219350 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642750036 |
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| Product | twitching motility protein |
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| Protein accession | YP_002120915 |
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| Protein GI | 195952625 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.292052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTTG ATATAGGGAC GTTAACAGAA ATACTGGTAA AAAACAAAGG AAGTGATATT
CACATAGTGG CAGGCTCTAA ACCTGCTATA AGAGCAGATG GCAAAATAAA GTTTTTAGAA
GAATACAATA CATTAACACC TGAAGATACA CAGCATTTAG CCTACGGCAT TATGCTTGAG
AAATATAAAA AAGTATTTGA AGAGAAAAAT GCAGTAGATT TTTCTATCGG AGTACACGGT
TTAGGCAGAT TTCGCGTAAA TGTATTTAGA CAAAGAGACT CTGTAAGTAT GGTTTTAAGA
TACTTAACCA GCGAGATAAA AGATATTACA AAATTAGGGT TGGACACAAA GGTCTTAGAA
CTTACCAAAA GGAGTATGGG ACTTATTCTA GTAACAGGTC CAACAGGTAG CGGTAAATCC
ACGACCTTAG CATCGATGAT ACAGTATATA CTTGATAATG AGCCTGTACA TGTTATAACA
GTGGAAGATC CGATAGAATA TCTTTTTAAA CATAGTAAAG GTATTGTAAA CCAGCGCGAG
TTAGGACAAG ATGTACCAAG TTTTTCCGAT GCTTTAAGAA GCGCTTTAAG AGAAGACCCA
GATGTAATAC TAGTAGGTGA AATGAGAGAT AGAGAAACTA TAGAAATGGC TTTAAGAGCA
GCTGAAACAG GGCACTTGGT ATTTGGAACA CTTCATACAA ATACCGCTAT ATCCACTATA
AATAGAATTG TAGATGTATT TAGTGCAGAA GAAAAGGATC AAATAAGGAC ACAGCTCTCT
ATCTCTTTGC AAGGTATTAT ATCTCAAAGG CTTTTACCCA AAATAAACGG TGGTAGAGTG
TTAGCTTACG AGCTTTTAAT ACCAAACACA GGTATAAGGA ATTTGATAAA AGAAAATAAG
CTACCACAAG CTTACGCTTT GATGCAATCA GGTCAAGCTC AAACAGGTAT GCAAACCATG
AATCAACACT TAAGAAAACT ATACGGTATG GGGCTTATAA CAAAAGAAGA TGCTCTAAAA
TACAGTCCAG ATCCAAAAGA ATTGGCAAGG TTAATGGGTG TAGCTTATGA AGAGATGTAG
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| Protein sequence | MQLDIGTLTE ILVKNKGSDI HIVAGSKPAI RADGKIKFLE EYNTLTPEDT QHLAYGIMLE
KYKKVFEEKN AVDFSIGVHG LGRFRVNVFR QRDSVSMVLR YLTSEIKDIT KLGLDTKVLE
LTKRSMGLIL VTGPTGSGKS TTLASMIQYI LDNEPVHVIT VEDPIEYLFK HSKGIVNQRE
LGQDVPSFSD ALRSALREDP DVILVGEMRD RETIEMALRA AETGHLVFGT LHTNTAISTI
NRIVDVFSAE EKDQIRTQLS ISLQGIISQR LLPKINGGRV LAYELLIPNT GIRNLIKENK
LPQAYALMQS GQAQTGMQTM NQHLRKLYGM GLITKEDALK YSPDPKELAR LMGVAYEEM
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