| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0216 |
|---|
| Symbol | |
|---|
| ID | 6743005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 195546 |
|---|
| End bp | 196823 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642750006 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_002120886 |
|---|
| Protein GI | 195952596 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACT TGCCAAATAT AGCTAATATA CACGCTGAAA CGGAGCTAAA CCTTCTTCTT
AAAAGAGCCA AACGCAAGCG AACCGCCGAT ATAAAAGAAT ACTTAAAAGA CAATGGATAT
CTTGCGTTAG AGAAAGCCCT AAGCATGAAG CCTGAAGACA TAGTAGAAGA AGTAGACAAC
AGCAATTTAA GAGGAAGAGG CGGAGCAGGT TTTCCTACTG GTAGAAAGTG GAAATTTTGT
CTTCAAAACA AAGCTCCTAG ATACTTGGTG TGCAACGCCG ATGAATCAGA GCCAGGCACT
TTTAAAGACA GGCTTATTAT AGAAAGGGAT CCTCATCTAC TTTTGGAGGG TATGATTATA
TCCGCTTACG CTCTTGGGGT CAACAGAGCT TACATATACA TAAGAGGCGA GTATCCAGCC
GGTTATTATA TATTAAGAAA CGCCATAGAA GAAGCAAAAA AAGAAGGTTT TTTGGGTAAA
AATATACTAA ACTCTGGTTT TGATCTTGAA ATACTTGTTT CAAGAGGAGC CGGTGCTTAT
ATCTGCGGTG AAGAGACGGC TCTTCTTAAC TCTATAGAAG GTAAAAGAGG GCATCCAAGG
CTAAAACCAC CTTTTCCAGT CCAGGTGGGC TTATGGGGTA GGCCTACAGT TGTAAACAAT
GTAGAAACGT TGTCAAATAT TCCTATTATT ATAAATTTAG GTTCTGAAGG CTATAAAGAG
ATAGGCCCTA TGGATTATCC TGGTCCTAAG CTTTTTCCAG TGAGCGGGAA GGTGAAAAAG
CCAGGTGTTT ATGAACTCCC CATGAATACA ACCCTAAGAG AGGTTATATT TAAATACGCT
GGTGGGACTA TTAGAAACGT TCCTATAAAG GCTGTATTTT CTGGAGCTCT TGATTGTCTT
AGCGTGAGTG AACTAGATAC TCCTATGGAT TACTCACAGT TTGGCTTTGG TGGTACTGGT
ACTGTGATAG TGCTAACTGA AGAAGATGAT ATAGTGAATG CTTGTTATAA GATAGCTGAG
TTTTATGAAC ATGAGACTTG TGGCTTTTGT ACACCGTGCC GTATAGGTTG CCACGAGCAA
GCTTATCTTC TTGACAAGAT AGAAAAAGAC GAAGCCACAC CAAAGACTTG GGAAGGTCTT
AGGTTTGTGA CAAAGTATAT TCAACCCACT TCTGTTTGTG GTCTTGGCGC TGTGGCTAGT
AGACTTATCA AACAAGCTAT GGAAAAGTTC CCAGAGGATT TTGCCAAGAA AGAACAAAAA
TCCTTTGTAA ATATTTAA
|
|---|
| Protein sequence | MKYLPNIANI HAETELNLLL KRAKRKRTAD IKEYLKDNGY LALEKALSMK PEDIVEEVDN
SNLRGRGGAG FPTGRKWKFC LQNKAPRYLV CNADESEPGT FKDRLIIERD PHLLLEGMII
SAYALGVNRA YIYIRGEYPA GYYILRNAIE EAKKEGFLGK NILNSGFDLE ILVSRGAGAY
ICGEETALLN SIEGKRGHPR LKPPFPVQVG LWGRPTVVNN VETLSNIPII INLGSEGYKE
IGPMDYPGPK LFPVSGKVKK PGVYELPMNT TLREVIFKYA GGTIRNVPIK AVFSGALDCL
SVSELDTPMD YSQFGFGGTG TVIVLTEEDD IVNACYKIAE FYEHETCGFC TPCRIGCHEQ
AYLLDKIEKD EATPKTWEGL RFVTKYIQPT SVCGLGAVAS RLIKQAMEKF PEDFAKKEQK
SFVNI
|
|---|
| |