Gene HY04AAS1_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_0111 
Symbol 
ID6742896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand+ 
Start bp101727 
End bp102344 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content35% 
IMG OID642749897 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002120781 
Protein GI195952491 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00780937 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATAAGA CAGTAGAAGA AAAGACACCT CAAAGAGAAA GCACAAAAGA CAAAATAATA 
GAGATAGCGG CTGAGATAAT TGCTCAGGAA GGTTTAAGAG GCTTTACGGC AAAAAACATA 
GCCGCTAGGC TCAATATAAC CGACGCCGCT ATATTTAAGC ATTTTAAAGA TATGAACGAC 
ATAGTCCAAA CAGTAGTCAA AAAGTATACA GGAGAGTGTC TAACAGCTAT AAGAAGTATA 
GTATTTGATA GGGATTTATC GATCCAGCAA AAGATAGATA AAATAATGGA TACTCATATA 
GACATGCTTG AGAAAAGTAA AGGCGCTATT CCGGTTCTGT GCTTTGAAGT ATCAAGGTCA 
AACATATACG ATAATAGAGC TGTTGTAAGT TTTTTAGAAA ACTATTTTGA TCTTATAAGC 
ATCCTTTTTC ATAGAGGTAT TGAAGAAGGT ATTATAAAAA AAGATTTAGA CATAGAAGAA 
GCTGCCTTTA CATTTTTAGG GCTTTTACAA TCAAGAGTGT TTATATGGTT TTTGAGGGGG 
AAAGAAGGTA GCATTGTAAA AGATAAAAAA ACATTGAAGA TGCTATTTGA GGAGGGGTTG 
TTTGGTGCAG GCTCATAA
 
Protein sequence
MHKTVEEKTP QRESTKDKII EIAAEIIAQE GLRGFTAKNI AARLNITDAA IFKHFKDMND 
IVQTVVKKYT GECLTAIRSI VFDRDLSIQQ KIDKIMDTHI DMLEKSKGAI PVLCFEVSRS 
NIYDNRAVVS FLENYFDLIS ILFHRGIEEG IIKKDLDIEE AAFTFLGLLQ SRVFIWFLRG 
KEGSIVKDKK TLKMLFEEGL FGAGS