Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0061 |
Symbol | |
ID | 6742843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 57534 |
End bp | 59111 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642749845 |
Product | RNA binding S1 domain protein |
Protein accession | YP_002120731 |
Protein GI | 195952441 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000665212 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAACAG AGTTTGAAGA GTTATTAAAA GCTCAAAAGG AGCAGTTTTC CACAGGAAGC GTAGTAAAGG GTTCTGTGGT AAAAATTACA GATTCAAACG TGTACTTGGA TATAGGTTAT AAAATAGAAG GCGTTATAAG GCGGTATGAA GTAGGTGATG TTGAGATAGG CCAAGAAATA GAGGCCGTTA TTATAAAACT AAGAGGAATT GAAAATCCAA TACTTTCCAC AAAACCCTTA AAATCTTCGA AAGGTTTTTC TATAGCCAAA AAAGCGTTAG AACAAAAAAC ACCTATAGAT GTTATAGTAG AATCAAAAGG AAAACCTGGA TTTTTTGTAC AACTTGAAGA TATTAGGGCT TTGATGCCCT TTGGTGAAGC TCCAAGGCAT GTAAATATAG GAGACAAAAT AAAGGTGTTG GTAACAAAAG CCACCTATGA AAATGGAAAA CCTATGGTAA ACGTATCTTA CAAAGAGTAT GAGAACATTG AAAGGCATCA AAAACAACTT GAATTTATAA ACTCGTTAGA AGTAGGCTCT ACAATAGAAG GAAAAGTAAT AAAAGTAGAC CCAGAAAAAG GTATTACAGT GCTTTTAAAA GAAGGGGTTA GAGGCTTCGT ACCGCATTAC GAAATACCAA AAGGCACAAA TATAAAAGAA AACGATACGT TAGAGGTTAG AGTTATTAAA AAAGCCAAAA AGGGTGATTT TCTTATATTA AGCCTAAGAA AACCAAAGAA GAATATATGG GAAACATTGG AGCTAAAAGA AGGAGACAAA ACAGAGGGCA AAGTATCTTT CTATAGAAAA GGGAAGGGGC TTTTCGTAGA ATTACAAGAA GGTATTACAG CCTTAGTACC AGAAGAAAGC ATGAAAAATA TCGGCAACAA GCTTTTAAAG AGTGGCACAA AACTAAAACT TGTTGTAACA AGAATAGACA AAGATAAAAA ACAAATAGAT GTAAACATAG TACCTTCTGA AGAAAACCCA GCAGCGGATT TTATAAAATC AAACCCACCA AATACGATAG TAAAGGGAAA AGTAAAAACC GTACATCCAA ACATTGCGTT TATAGAGCTA GGACCAAACG TAGAAGGCAT AGTGAAAAAA CAAGATATGT CTTGGCTTAA AAACGCACGC TCAGAAGAGT TGCTTACCCC TGGAGAAGAA AAAGAGTTTA TGGTACTAGG CCTAGATGGT AAAAAAGTAA AGCTTGGCTT AAAGCAGCTT ACTCAAAATC CTTGGAGTGT AATACCAGAA AGGTACAAAC CAGGACAACA AGTAGAGCTT GCGGTAAAAG AAGTAAGACC TTTTGGTACC TTCTTAGGTT TGCCAGAAGG CATAGATGGC CTATTGCCAA TATCTGAAAT ACCTAAAAAC ACAAACTTAG AGCCTGGTCA AAACATAACG GTTAAAGTTT TAGAGGTAAA TCCAAAAGAG GAAAAAATTA CTTTCAGTAT GATACAAGAA ACCAAAAAAC AGCAAAAAGA ACAAGGCGAC CAAAAAGAGT TTATAAAAGT AAACGACTCT TCATCTGGCT TTAAGCTTGG TGATATCCTT AAGAACAAGT TAAAGTGA
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Protein sequence | MVTEFEELLK AQKEQFSTGS VVKGSVVKIT DSNVYLDIGY KIEGVIRRYE VGDVEIGQEI EAVIIKLRGI ENPILSTKPL KSSKGFSIAK KALEQKTPID VIVESKGKPG FFVQLEDIRA LMPFGEAPRH VNIGDKIKVL VTKATYENGK PMVNVSYKEY ENIERHQKQL EFINSLEVGS TIEGKVIKVD PEKGITVLLK EGVRGFVPHY EIPKGTNIKE NDTLEVRVIK KAKKGDFLIL SLRKPKKNIW ETLELKEGDK TEGKVSFYRK GKGLFVELQE GITALVPEES MKNIGNKLLK SGTKLKLVVT RIDKDKKQID VNIVPSEENP AADFIKSNPP NTIVKGKVKT VHPNIAFIEL GPNVEGIVKK QDMSWLKNAR SEELLTPGEE KEFMVLGLDG KKVKLGLKQL TQNPWSVIPE RYKPGQQVEL AVKEVRPFGT FLGLPEGIDG LLPISEIPKN TNLEPGQNIT VKVLEVNPKE EKITFSMIQE TKKQQKEQGD QKEFIKVNDS SSGFKLGDIL KNKLK
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