Gene SeSA_A4488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4488 
Symbol 
ID6516203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp4352273 
End bp4352836 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content44% 
IMG OID642749438 
ProductDNA-invertase 
Protein accessionYP_002117174 
Protein GI194734225 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.258493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0155508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTACG GGTATGTTCG TGTATCAACA AATCATCAGG ATACAGAGTT GCAACGTCTT 
GCACTTGAGT CAGCTGGCTG TGAGCGAATT TATGAAGAAT ATGCCAGTGG CAGAACAGCT 
AATCGCCCTG TGTTAAAGGA ATTAATTACG GTGATGAAAA GTGGAGATGA GTTGATTGTC 
TGGAAGTTAG ATCGGATAGG GAGAAATGTG CTGCATGCGC TATTGATGTT TCAAAATCTG 
CACGAAAAAG GTGTTAATTT TCGGAGTATT ACAGATGGCG TAGACCTGAA AACAGCAAGT 
GGTCGCTATA ATTTCCGTAA TATTCTTTCT GCTGCGCAGT ATGAATCTGA TTTGAATAGC 
GAGCGAACTT TAGCTGGTTT GGCTATTGCC AGATCCAAAG GCCGGATTGG TGGGCGTAGA 
CCGAAGTTTA GCGACGAGCA GTGGCAACAG ATGGGAGCGC TCATAGCGGC AGGGAAATCA 
CGGCGTTATG TTGCACGTAT CTATAACGTT GGGCTATCAA CCCTATATAA ACGATTTCCT 
GTTACTGGCA TTCAAACGAA ATAA
 
Protein sequence
MIYGYVRVST NHQDTELQRL ALESAGCERI YEEYASGRTA NRPVLKELIT VMKSGDELIV 
WKLDRIGRNV LHALLMFQNL HEKGVNFRSI TDGVDLKTAS GRYNFRNILS AAQYESDLNS 
ERTLAGLAIA RSKGRIGGRR PKFSDEQWQQ MGALIAAGKS RRYVARIYNV GLSTLYKRFP 
VTGIQTK