| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3962 |
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| Symbol | |
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| ID | 6518780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 3835324 |
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| End bp | 3838191 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642748934 |
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| Product | outer membrane autotransporter barrel domain |
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| Protein accession | YP_002116696 |
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| Protein GI | 194734010 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACTC CCCAAAATTA CTCATTCATC GCCATAGCGG TATCAGCAGC ATTAGCCTCT
ATGGTATTTC CCTCCCAGGC GGCCTGGGTC GACGTTGATA GTCTGCCATC CAGTGGGCTG
GTCAGCCAGT TGCCGCCGGA ATTACAGGCT ATTATTCCCG CTCAGGCCAG TACCGGTTTC
ACCAAAGTCG GTACCATGCC CAACTACGTT TATCAGTGGA ACACCGGTAC CATCCCGGTT
TATGGCAATG GCCTCACGCT TAATGGGCCG GGCGCGGAGG CGTTTGAACA CACAGTCACG
GTTATTCAAA ACAGCGGGAC GGGAAGTCCG GGCGTGATTT TTGGCAACGA CCTGACCATT
CGGACGCAGT CGGCGAATGC CGCGAATAAT GGTAGAGACG TCGATGGCAT CCGTACTCAC
GGCGCGAATA CTCCGGATAA CCCGGTATTT ATTATTACCG GTGACCGTAC CCGCATCTAC
GTGGATGGTC AGGATGGTGA CGGTATTAAC GCCGGATATA ACTCACTGGG CCAGGGTTGG
ACCGGATCGG CCAATATTTA CGTCGGCGAC GATCTGTATA TCAAAACAAC AGGTAGCCAG
GGACGTGGAA TTACAGCTAA CGCCATGCGG GATGCGTCAC GTGCCAAAAA TACGATTGTC
GTCGGCAATC GTGCACATAT TGTTACTACC GGCGACAGTT CGGAGGGGCT ACGTACCGGA
CAAAGCGGTT CGTTGATTCG TCTGGGTGAC GATGCAACCA TCGAAACCTC CGGCGCATCC
TCAACGGGGA TTTACGCAGC ATCATCCTCC AGAACCGAGC TTGGCAACAA CGCTACTATT
ACGGTGAACG GTGCCAGCGC ACACGCGGTA TATGCAACTA ACGCTACCGT TAATTTGGGA
GATAATGCCA CTATTAGCGT CAACAGCGCC AGTAAGGCTG CATCCTATAG TAAAGCCCCT
GCCGGTTTAT ACGCCCTCTC CCGAGGCGCC ATTAATCTGG CAGGCGGTGC GGCTATTACT
ATGGCGGGCG ATAACAGTAG CGAAAGTTAC GCCATCAGCA CGGAGACTGG CGGCATTGTT
GACGGTTCTT CAGGAGGACG TTTCGTCATC GACGGTGATA TTCGTGCTGC TGGCGCCACC
GCTGCCAGCG GTACGCTACC GCAGCAGAAC AGTACGATTA AGCTCAATAT GACGGACAAC
TCGCGGTGGG ACGGGGCGTC GTACATCACC AGCGCTACGG CGGGCACAGG CGTTATCTCT
GTACAAATGA GCGATGCGAC CTGGAATATG ACCAGCAGCT CAACGCTCAC TGACCTGACG
CTGAATAGTG GCGCAATCAT TCACTTCAGC CATGAAGATG GCGAGCCATG GCAAACGCTC
ACCATCAATG AAGATTATGT AGGCAACGGC GGTAAGCTGG TCTTTAATAC TGTGCTCAAC
GATGATGATT CCGAAACGGA CAGGCTGCAG GTTCTCGGCA ATACTTCAGG CAACACATTT
GTTGCAGTAA ATAATATTGG AGGAGCCGGG GCGCAAACCA TTGAAGGTAT TGAAATTGTT
AACGTTGCTG GCAATTCTAA CGGTACTTTC GAAAAAGCAA GCCGTATTGT TGCCGGAGCC
TATGACTACA ACGTGGTGCA GAAAGGTAAA AACTGGTATC TGACCAGCTA CATTGAGCCG
GACGAACCGA TTATTCCTGA TCCAGTAGAC CCAGTTATCC CTGACCCTGT CATTCCCGAT
CCGGTGGACC CTGATCCTGT AGACCCGGTC ATCCCTGACC CTGTTATTCC CGATCCGGTG
GACCCTGATC CTGTAGACCC TGAGCCAGTA GACCCGGTCA TCCCTGATCC GGTCATTCCT
GACATAGGGC AATCTGACAC ACCGCCGATA ACAGAACATC AGTTCCGTCC GGAAGTGGGC
AGCTATCTTG CCAACAACCA TGCGGCAAAT ACGCTGTTCA TGACGCGTCT CCATGACCGT
CTGGGTGAAA CCCAGTACAC CGACATGCTG ACGGGTGAGA AGAAGGTCAC CAGCCTGTGG
ATGCGTAACG TCGGCGCCCA TACTCGCTTC AACGATGGCA GCGGGCAGCT AAAAACCCGC
ATCAACAGCT ATGTGTTACA ACTGGGAGGC GATCTGGCAC AGTGGAGCAC TGACGGTCTT
GACCGTTGGC ATATTGGTGC AATGGCAGGT TATGCCAACA GCCAGAACCG CACGCTGTCG
TCCGTGAGTG ACTATCATTC CCGTGGTCAA GTCACCGGTT ACAGCGTCGG CCTTTATGGC
ACCTGGTATG CTAACAATAT CGATCGGTCT GGAGCTTATG TGGATACCTG GATGCTGTAC
AACTGGTTTG ATAACAAGGT TATGGGTCAG GATCAGGCCG CTGAGAAATA TAAATCCAAA
GGAATTACCG CCTCGGTTGA AGCCGGTTAC AGCTTCAGGT TAGGTGAAAG CGCGCATCAA
AGCTACTGGT TGCAGCCCAA AGCGCAGGTA GTATGGATGG GCGTGCAGGC TGACGACCAT
CGCGAAGCCA ATGGTACTCT CGTGAAGGAT GATACCGCCG GTAATCTGCT AACCCGCATG
GGCGTAAAAG CCTATATTAA CGGCCACAAC GCTATTGATA ACGATAAATC TCGAGAGTTC
CAGCCGTTCG TGGAAGCGAA CTGGATCCAT AATACGCAGC CTGCCAGCGT GAAGATGGAC
GATGTCAGCA GCGATATGCG TGGTACGAAA AATATTGGTG AACTGAAAGT GGGCATTGAA
GGGCAAATTA CCCCGAGCCT GAACGTATGG GGTAACGTGG CGCAACAGGT AGGTGACCAG
GGCTATAGTA ATACCCAAGG CCTACTGGGG GTTAAATACA GTTTCTGA
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| Protein sequence | MPTPQNYSFI AIAVSAALAS MVFPSQAAWV DVDSLPSSGL VSQLPPELQA IIPAQASTGF
TKVGTMPNYV YQWNTGTIPV YGNGLTLNGP GAEAFEHTVT VIQNSGTGSP GVIFGNDLTI
RTQSANAANN GRDVDGIRTH GANTPDNPVF IITGDRTRIY VDGQDGDGIN AGYNSLGQGW
TGSANIYVGD DLYIKTTGSQ GRGITANAMR DASRAKNTIV VGNRAHIVTT GDSSEGLRTG
QSGSLIRLGD DATIETSGAS STGIYAASSS RTELGNNATI TVNGASAHAV YATNATVNLG
DNATISVNSA SKAASYSKAP AGLYALSRGA INLAGGAAIT MAGDNSSESY AISTETGGIV
DGSSGGRFVI DGDIRAAGAT AASGTLPQQN STIKLNMTDN SRWDGASYIT SATAGTGVIS
VQMSDATWNM TSSSTLTDLT LNSGAIIHFS HEDGEPWQTL TINEDYVGNG GKLVFNTVLN
DDDSETDRLQ VLGNTSGNTF VAVNNIGGAG AQTIEGIEIV NVAGNSNGTF EKASRIVAGA
YDYNVVQKGK NWYLTSYIEP DEPIIPDPVD PVIPDPVIPD PVDPDPVDPV IPDPVIPDPV
DPDPVDPEPV DPVIPDPVIP DIGQSDTPPI TEHQFRPEVG SYLANNHAAN TLFMTRLHDR
LGETQYTDML TGEKKVTSLW MRNVGAHTRF NDGSGQLKTR INSYVLQLGG DLAQWSTDGL
DRWHIGAMAG YANSQNRTLS SVSDYHSRGQ VTGYSVGLYG TWYANNIDRS GAYVDTWMLY
NWFDNKVMGQ DQAAEKYKSK GITASVEAGY SFRLGESAHQ SYWLQPKAQV VWMGVQADDH
REANGTLVKD DTAGNLLTRM GVKAYINGHN AIDNDKSREF QPFVEANWIH NTQPASVKMD
DVSSDMRGTK NIGELKVGIE GQITPSLNVW GNVAQQVGDQ GYSNTQGLLG VKYSF
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