Gene SeSA_A3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3550 
Symbol 
ID6516577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3424128 
End bp3424757 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID642748536 
Productputative GntR-family transcriptional regulator 
Protein accessionYP_002116306 
Protein GI194734555 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.829972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAGA TCCAAAGAAC GCAAACCCGC GATCACATTA CGCAAATGCT TCGCTATGAA 
ATTCTTTCCG GCAATATAAA AGCGGGAGAA GAACTCGCGC AGGAAAGTAT TGCGGAGCAG 
CTTGGTCTTT CACGAATGCC GGTTCGAGAA GCGCTACAGT CACTCGAACA GGAAGGTTTT 
TTAATCCGAC TGCCCAACAG GCACATGCAG GTCGCGCATC TTGAGGCCGA TCGCGTGAGT 
CATATTTTTC GCGTAATTGC CGCGATGGCC GCCGAAATGT TTTCGCTGAT ACCCAGCGAA 
GTAGGCGATG CCCTTCTGAT ACGTGCGCAA GCGCTGGCTG TCGCAGAAGA CAAATCCTGC 
GAACTGGAGT GTCATGCGAT GCTGATTTCT TATGTGAATA ACCGCTATCT GGAAAAGGTG 
TATCAGCAGT TCCTGGACGG CTATGTTTCT TATGTTATTT TGCATCTGAA AAAAGATAAT 
CAGGAGTCGG CGCAGCTTTT CGCTGAACTG GCTGACGTCA TACGCCAGGG GCGGCGTGAT 
GAGATTGGGC AAGTTATGCA GCGTTATTTC CTCTCTTTAG CAGAAATAAT GCGTCAACAT 
ATGAAGGATT GGGAAAGTGC AGAAGCCTAA
 
Protein sequence
MKKIQRTQTR DHITQMLRYE ILSGNIKAGE ELAQESIAEQ LGLSRMPVRE ALQSLEQEGF 
LIRLPNRHMQ VAHLEADRVS HIFRVIAAMA AEMFSLIPSE VGDALLIRAQ ALAVAEDKSC 
ELECHAMLIS YVNNRYLEKV YQQFLDGYVS YVILHLKKDN QESAQLFAEL ADVIRQGRRD 
EIGQVMQRYF LSLAEIMRQH MKDWESAEA