Gene SeSA_A3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3206 
Symbol 
ID6520016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3100112 
End bp3100864 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content55% 
IMG OID642748214 
ProductYgeR 
Protein accessionYP_002115988 
Protein GI194737641 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.317836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCAG GACGCCTGAA CAAAAATAGC CTGGGTATTG CGGTGCTGTT ATGCACAGGG 
CTGCTGCTGG CGGGGTGTTC CAGTAATTCC GGCTCAGGAA CGTATTCCGG CTCCGTCTAT 
ACCGTTAAGC GCGGCGATAC GTTGTATCGT ATATCGCGCG CCACGGGAAC CAGCGTGAAA 
GAACTGGCCC GACTGAATGG CATTTCTCCG CCTTATACTA TTGAGGTGGG GCAGCGAATT 
AAAGTGCGCG GCAGCGCAAA GAGTAGCAGT TCAACACGCA AAACCAGCAA TAAAACAGCA 
ACAAAAACTG CCGCGGTCAG ACCGTCATCT TCGGTGCCAA AATCCTCCTG GCCGCCGGTG 
GGGCAGCGCT GTTGGGTATG GCCTGCCAAC GGTAAAGTGA TTTTACCTTA TTCCACCGCA 
GAGGGCGGAA ATAAGGGCAT CGATATTGCG GGCGCGCGCG GAACGCCTGT TTATGCGGCG 
GGAGCGGGTA AAGTTGTCTA TGTCGGGAAC CAGCTGCGCG GTTACGGCAA TCTCATCATG 
ATTAAGCACA ATGAAGATTA CATTACGGCT TACGCTCATA ATGACACCAT GCTGGTTAAT 
AATGGGCAAA GCGTTAAAGC GGGGCAAAAA ATCGCTACGA TGGGCAGCAC GGATGCCGCA 
TCCGTAAGGC TACACTTCCA GATTCGCTAC CGGGCGACGG CCATCGATCC GCTGCGTTAT 
CTGCCGCCGC AGGGGAGTAA ACCGAAGTGC TGA
 
Protein sequence
MSAGRLNKNS LGIAVLLCTG LLLAGCSSNS GSGTYSGSVY TVKRGDTLYR ISRATGTSVK 
ELARLNGISP PYTIEVGQRI KVRGSAKSSS STRKTSNKTA TKTAAVRPSS SVPKSSWPPV 
GQRCWVWPAN GKVILPYSTA EGGNKGIDIA GARGTPVYAA GAGKVVYVGN QLRGYGNLIM 
IKHNEDYITA YAHNDTMLVN NGQSVKAGQK IATMGSTDAA SVRLHFQIRY RATAIDPLRY 
LPPQGSKPKC