Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3049 |
Symbol | |
ID | 6516829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2945596 |
End bp | 2947653 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642748071 |
Product | invasion protein InvA |
Protein accession | YP_002115848 |
Protein GI | 194736186 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4789] Type III secretory pathway, component EscV |
TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.459532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.115833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTTT CTCTACTTAA CAGTGCTCGT TTACGACCTG AATTACTGAT TCTGGTACTA ATGGTGATGA TCATTTCTAT GTTCGTCATT CCATTACCTA CCTATCTGGT TGATTTCCTG ATCGCACTGA ATATCGTACT GGCGATATTG GTGTTTATGG GGTCGTTCTA CATTGACAGA ATCCTCAGTT TTTCAACGTT TCCTGCGGTA CTGTTAATTA CCACGCTCTT TCGTCTGGCA TTATCGATCA GTACCAGCCG TCTTATATTG ATTGAAGCCG ATGCCGGTGA AATTATCGCC ACGTTCGGGC AATTCGTTAT TGGCGATAGC CTGGCGGTGG GTTTTGTTGT CTTCTCTATT GTCACCGTGG TCCAGTTTAT CGTTATTACC AAAGGTTCAG AACGCGTCGC GGAAGTCGCG GCCCGATTTT CTCTGGATGG TATGCCCGGT AAACAGATGA GTATTGATGC CGATTTGAAG GCCGGTATTA TTGATGCGGA TGCCGCGCGC GAACGGCGAA GTGTACTGGA AAGGGAAAGC CAGCTTTACG GTTCCTTTGA CGGTGCGATG AAGTTTATCA AAGGTGACGC TATTGCCGGC ATCATTATTA TCTTTGTGAA CTTTATTGGC GGTATTTCGG TGGGGATGAC CCGCCATGGT ATGGATTTGT CCTCCGCCCT GTCTACTTAT ACCATGCTGA CCATTGGTGA TGGTCTTGTC GCCCAGATCC CCGCATTGTT GATTGCGATT AGTGCCGGTT TTATCGTGAC TCGCGTAAAT GGCGATAGCG ATAATATGGG GCGGAATATC ATGACGCAGC TGTTGAACAA CCCATTTGTA TTGGTTGTTA CGGCTATTTT GACCATTTCA ATGGGAACTC TGCCGGGATT CCCGCTGCCG GTATTTGTTA TTTTATCGGT GGTTTTAAGC GTACTCTTCT ATTTTAAATT CCGTGAAGCA AAACGTAGCG CCGCCAAACC TAAAACCAGT AAAGGCGAGC AGCCGCTCAG TATTGAGGAA AAAGAAGGGT CGTCGTTGGG ACTGATTGGC GATCTCGATA AAGTCTCTAC AGAAACCGTA CCGTTGATAT TACTTGTGCC GAAGAGCCGG CGTGAAGATC TGGAAAAAGC TCAACTTGCG GAGCGTCTAC GTAGTCAGTT CTTTATTGAT TATGGCGTGC GCCTGCCGGA AGTATTGTTA CGCGATGGCG AGGGTCTGGA CGATAACAGC ATCGTATTGT TGATTAATGA GATCCGTGTT GAACAATTTA CGGTCTATTT TGATTTGATG CGAGTGGTAA ATTATTCCGA TGAAGTTGTT TCCTTTGGCA TTAATCCAAC AATCCATCAG CAAGGTAGCA GTCAGTATTT CTGGGTAACG CATGAAGAGG GGGAGAAACT GCGGGAGCTT GGCTATGTGT TGCGGAACGC GCTTGATGAG CTTTACCACT GTCTGGCGGT GACGCTGGCG CGCAACGTCA ATGAATATTT CGGTATTCAG GAAACAAAAC ATATGCTGGA CCAACTGGAA GCGAAATTTC CTGATTTACT TAAAGAAGTG CTCAGACATG CCACGGTACA ACGTATATCT GAAGTTTTGC AGCGTTTGTT AAGCGAACGT GTTTCCGTGC GTAATATGAA ATTAATTATG GAAGCGCTCG CATTGTGGGC GCCAAGAGAA AAAGATGTCA TTAACCTTGT GGAGCATATT CGTGGGGCAA TGGCGCGTTA TATTTGCCAT AAATTCGCCA ATGGCGGCGA ATTACGAGCA GTAATGGTAT CTGCTGAAGT TGAGGATGTT ATTCGCAAAG GGATCCGTCA GACCTCTGGC AGTACCTTCC TCAGCCTTGA CCCGGAAGCC TCCGCTAATT TGATGGATCT CATTACACTT AAGTTGGATG ATTTATTGAT TGCACATAAA GATCTTGTCC TCCTTACGTC TGTCGATGTC CGTCGATTTA TTAAGAAAAT GATTGAAGGT CGTTTTCCGG ATCTGGAGGT TTTATCTTTC GGTGAGATAG CAGATAGCAA GTCAGTGAAT GTTATAAAAA CAATATAA
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Protein sequence | MLLSLLNSAR LRPELLILVL MVMIISMFVI PLPTYLVDFL IALNIVLAIL VFMGSFYIDR ILSFSTFPAV LLITTLFRLA LSISTSRLIL IEADAGEIIA TFGQFVIGDS LAVGFVVFSI VTVVQFIVIT KGSERVAEVA ARFSLDGMPG KQMSIDADLK AGIIDADAAR ERRSVLERES QLYGSFDGAM KFIKGDAIAG IIIIFVNFIG GISVGMTRHG MDLSSALSTY TMLTIGDGLV AQIPALLIAI SAGFIVTRVN GDSDNMGRNI MTQLLNNPFV LVVTAILTIS MGTLPGFPLP VFVILSVVLS VLFYFKFREA KRSAAKPKTS KGEQPLSIEE KEGSSLGLIG DLDKVSTETV PLILLVPKSR REDLEKAQLA ERLRSQFFID YGVRLPEVLL RDGEGLDDNS IVLLINEIRV EQFTVYFDLM RVVNYSDEVV SFGINPTIHQ QGSSQYFWVT HEEGEKLREL GYVLRNALDE LYHCLAVTLA RNVNEYFGIQ ETKHMLDQLE AKFPDLLKEV LRHATVQRIS EVLQRLLSER VSVRNMKLIM EALALWAPRE KDVINLVEHI RGAMARYICH KFANGGELRA VMVSAEVEDV IRKGIRQTSG STFLSLDPEA SANLMDLITL KLDDLLIAHK DLVLLTSVDV RRFIKKMIEG RFPDLEVLSF GEIADSKSVN VIKTI
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