Gene SeSA_A2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2838 
Symbol 
ID6517656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2736869 
End bp2737768 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content51% 
IMG OID642747871 
ProductLysR substrate binding domain protein 
Protein accessionYP_002115656 
Protein GI194737605 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.329645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGC GTCGGTTTAT TACGCTGAAA ACGGTAGTGG AAGAGGGCTC GTTTCTGCGG 
GCTTCGCAAA AGCTGTGCTG TACTCAGTCG ACGGTAACTT TTCATATTCA ACAGCTTGAA 
CGTGAGTTTT CCCTGCAACT GTTCGAGAAA ATAGGGCGCC GAATGTGTCT GACCAATGAG 
GGGAAAAAGC TGATGCCGCA TATCCATGAA CTGACGCGTG TGATGGAGTC GATTCGTGAA 
GCCGCAAGAC AGGATGCGGA ACCCGGCGGG GAGCTGCGCG TGGCGACAGG TGAAACCTTA 
CTGGCGTACA AAATGCCGCA GGTTTTACAA CGATTTAAGC TGCGAGCGCC GAATGTCAGA 
TTGTCGCTAC AGTCGCTGAA TTGCTATGTA ATACGTGATG CGTTGCTGAA TGACGAGGTC 
GATCTGGGCG TTTTTTATCG CGTAGGTAAT GATGATGCGC TCACGATGCA GCAACTGGGG 
GAGCAGTCGC TGGCGCTGGT GGCCTCTCCA CTGCTACAGG ATGCTGATTT TACGCAGCCA 
GATCAGCATA TTCCCTGTAG CTTCATCATC AATGAACCGC AATGTGTCTT CCGCCAGCTG 
TTTGAAAGTA CGCTACGGCA GAGGCGGATT ACGCTGGAAA ACACCATTGA ACTGTGGAGT 
ATTGAAAGCA TTAAACAGTG TGTGGCTGCT AACCTGGGCA TCAGCTTTTT ACCACGTTTT 
ACCGTTGAAC GAGAACTTAG TACCGGTCAG TTGAAAGAGC TGCCGTTTGG CGCGCCGTCG 
CTATCGATCA TGGCGCTGTG CGCCCATCAT GCCGGGAAAG CGGTCAGCCC GGCAATGCAG 
ATATTTATGC AGTGTATGGA GGCGTGTTTT ACCGTGGAAG ATAAAAAAAT GCCGGGTTAA
 
Protein sequence
MDLRRFITLK TVVEEGSFLR ASQKLCCTQS TVTFHIQQLE REFSLQLFEK IGRRMCLTNE 
GKKLMPHIHE LTRVMESIRE AARQDAEPGG ELRVATGETL LAYKMPQVLQ RFKLRAPNVR 
LSLQSLNCYV IRDALLNDEV DLGVFYRVGN DDALTMQQLG EQSLALVASP LLQDADFTQP 
DQHIPCSFII NEPQCVFRQL FESTLRQRRI TLENTIELWS IESIKQCVAA NLGISFLPRF 
TVERELSTGQ LKELPFGAPS LSIMALCAHH AGKAVSPAMQ IFMQCMEACF TVEDKKMPG