Gene SeSA_A2237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2237 
Symbol 
ID6518705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2121305 
End bp2123653 
Gene Length2349 bp 
Protein Length782 aa 
Translation table11 
GC content47% 
IMG OID642747306 
Productsecreted effector protein 
Protein accessionYP_002115099 
Protein GI194737724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.480484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.20722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAT CATCAGGCAC AATTAATTTT TCTACTATTC CTAACCAGGT TAAAAAATTA 
ATTACCTCTA TTCGTGAACA TACGAAAAAC GGGCTCGCCT CAAAAATAAC CAGTGTTAAA
AACACGCATA CATCTTTAAA TGAAAAATTT AAAACAGGAA AGGACTCACC GATTGAGTTC
ACGTTACCAC AAAAAATAAA AGACTTCTTT CAGCCGAAAG ATAAAAACAC CTTAAACAAA
ACATTGATTA CTGTTAAAAA TATTAAAGAT ACAAATAATA CAGGTAAGAA AAATATTTCA
GAAGAAGATG CCTCAAAAAT GACTGCAGCA TTCATGCGTA AGCATATAGC AAATCAATCA
CGTGATTATA ATTACAGAGT GACAGGTGCG GCCCCGCTCC CCGGTGGAGT CTCTGTATCA
GCCAATAACA GGCCAACGGT TTCTGAAGGT AGAACACCAC CAGTATCCCC CTCCCTCTCA
CTTCAGGCTA CGTCTTCCCC GTCATCACCT GCCGACTGGG CTAAGAAACT CACGGATGCA
GTTTTACGAC AGCAAGCCGG AGAACCCCTT ACGACCGCAG ATCGCGATTT TTCAAACGCA
GATTTCCGTA ATATTAAATT CAGCAAAATA TTGCCCCCCA ACTTCATGAA GCGAGACGGC
GATATTATCA AGGGGTTCAA CTTTTCAAAT TCAAAATTTA CTTATTCTGA TATATCTCAT
TTACATTTTG ACGAATGCCG ATTCACTTAT TCGACACTGA ATGATGTAGT CTGCAGTAAT
ACGAAATTTA GTAATTCAGA CATGAATGAA GTGTCTTTAC TGTATTCAAT TACTACACAA
CAACAGCCCT CTTTTATTAA TACAACCTTA AAAAATACGC TTATACCTCA CAAAGCCAAC
CTCTCCGACG TTATTTTAAA TGAACCGGAT AATTCATCAC CTCCGTCAGT GTCAGGGGGC
GGAAATTTTA TTCGTCTAGG TGATATCTGG CTGCAAATGC CACTCCTTTG GACTGAGAAC
GCTGTGGATG GATTTTTAAA TCATGAACAT AATAATGGTA AAAGTATTCT GATGACCATT
AACAACCTGC CCGATAAATA CAGACAGGAA AAAGTCCGGG CAATGGAAGA TCTGGTAAAG
TCATTTCGGA GTGGCCGCTT AACAGAGGCA CGTATCCGGC CAGTTGAAAG CTCGCTGGTG
AGCGTACTGG CCCACCCCCC CTATACGCAA AGTGCGCTTA TCAGCGAGTG GATCAGGCCT
GTTCAGGAAC GTTTTTTTGC CCACCAGTGC CAGACCTATA ATGACGTTCC CCTGCCGGCT
CCTGACACAT ATTATCAGCA GCGCATACTG CCTGTGTTGC TGGATTCGTT TGACAGGAAC
AGCGCCGCCA TGACCACTCA CAGCGGACTC TTTAATCAGG TGATTTTACA CTGTATGACA
GGCGTGGACT GCACTGATGG CATCCGCCAG AAAGCTGCAG CGCTTTATGA ACAGTATCTT
GCTCACCCGG CGGTGTCTCC CCACATCCAT AATGGGCTCT TCGGCAATTA TGACGGCAGC
CCGGACTGGA CAACCCGCGC TGCAGATAAT TTCCTGCTGC TTTCCTCCCA GGATTCAGAC
ACGGCGATGA TGCTCTCCAC TGACACGCTG TTAACAATGC TAAACCCTAC TCCTGACACT
GCATGGGACA ACTTTTACCT GCTGCGAGCC GGAGAGAACG TTTCCACCGC GCAAATCTCT
CCGGTAGAGT TATTCCGTCA TGACTTTCCG GTGTTTCTCG CCGCATTTAA TCAGCAGGCC
GTGCAGCGAC GCTTTGGGGA ACTGATTGAT ATCATCCTCA GCACTGAAGA GCACGGGGAG
CTGAACCAGC AGTTTATTGC CGCCACGAAC CAGAAACATT CCACCGTGAA GTTGATTGAT
GATGCCTCAG TGTCGCGTCT GAACACCATT TTTGACCCCC TGCTTCCTGA AGGCAAACTC
AGCCCGGCAC ACTACCAGCA CATCCTCAGT GCTTATCACC TGACTGACGC CACCCCACAG
AAGCAGGCGG AAACCCTGTT CTGTCTCAGT ACCGCATTCG CACGCTATTC CTCCAGCGCC
ATTTTCGGCA CTGAGCATGA CTCTCCGCCG GCCCTGAGAG GCTATGCGGA GGCGCTGATG
CAGAAAGCCT GGGAGCTGTC TCCGGCGATC TTCCCGTCCA GCGAACAGTT TACCGACTGG
TCCGACCGTT TTCACGGCCT CCATGGCGCC TTTACCTGTA CCAGCGTTGT GGCGGATAGT
ATGCAACGTC ATGCCAGAAA ATATTTCCCG AGTGTTCTGT CATCCATCCT GCCACTGGCC
TGGGCGTAG
 
Protein sequence
MKISSGTINF STIPNQVKKL ITSIREHTKN GLASKITSVK NTHTSLNEKF KTGKDSPIEF 
TLPQKIKDFF QPKDKNTLNK TLITVKNIKD TNNTGKKNIS EEDASKMTAA FMRKHIANQS
RDYNYRVTGA APLPGGVSVS ANNRPTVSEG RTPPVSPSLS LQATSSPSSP ADWAKKLTDA
VLRQQAGEPL TTADRDFSNA DFRNIKFSKI LPPNFMKRDG DIIKGFNFSN SKFTYSDISH
LHFDECRFTY STLNDVVCSN TKFSNSDMNE VSLLYSITTQ QQPSFINTTL KNTLIPHKAN
LSDVILNEPD NSSPPSVSGG GNFIRLGDIW LQMPLLWTEN AVDGFLNHEH NNGKSILMTI
NNLPDKYRQE KVRAMEDLVK SFRSGRLTEA RIRPVESSLV SVLAHPPYTQ SALISEWIRP
VQERFFAHQC QTYNDVPLPA PDTYYQQRIL PVLLDSFDRN SAAMTTHSGL FNQVILHCMT
GVDCTDGIRQ KAAALYEQYL AHPAVSPHIH NGLFGNYDGS PDWTTRAADN FLLLSSQDSD
TAMMLSTDTL LTMLNPTPDT AWDNFYLLRA GENVSTAQIS PVELFRHDFP VFLAAFNQQA
VQRRFGELID IILSTEEHGE LNQQFIAATN QKHSTVKLID DASVSRLNTI FDPLLPEGKL
SPAHYQHILS AYHLTDATPQ KQAETLFCLS TAFARYSSSA IFGTEHDSPP ALRGYAEALM
QKAWELSPAI FPSSEQFTDW SDRFHGLHGA FTCTSVVADS MQRHARKYFP SVLSSILPLA
WA