Gene SeSA_A2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2182 
Symbol 
ID6517117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2073287 
End bp2074669 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content38% 
IMG OID642747253 
Productlysine decarboxylase 
Protein accessionYP_002115046 
Protein GI194736607 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.198287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCA AAATTGTTAA AATGAAAGAG AATACACCTG TTCTGGCAGG GCTGAAAAGA 
CTTTGCCATA GGAAAATGTA TTCATTCCAC GCTTTGCCTA TTTCGAGTCA TGGTCAGAGT 
GATATTGTTG GCGATACCAG AGAATTTCTT TCTGAATGTC TGGAGGGGTC AGCAACTGGT 
GAACTCTTCG ATAATTTCTT TTTCCCTCAT GGGATTATTG CTGAATCACA AAAATTGACA 
GCAAAGCTTT ATAATGCTGA CGCATCATTT TACATCACCA GTGGAACAAG TACATCTAAC 
CAAATAGCGA TCACTGCTCT TTTTGAAAAG GGTCAACGCA TTTTGATTGA TAAAAATTGT 
CACCAATCAA TTCATTTTCA TGCACAAGCA ATTGGTGCTG AAGTTCGTTA CCTTTGTCCT 
GATTTGCAGA CAATGGATCA GGAAATAAGT GCATGGTCAT ATGCACACTT AGAAAATACA 
CTCTTATCAT TACAGAATGA AGGTAAAGGG TGTGATATTG TGATTCTGAC AGCACAGTCC 
TATGAGGGCA TCATTTATGA TATTCCACAG GTATTGGCCC ATCTTTTGTC AGCTGGTGTG 
CAGGCTCGAA AATTTTTTAT TGATGAGGCA TGGGGGAGTC TGAATTATTT TAGTGAAGAT 
ACGAGACAGC TAACAGCAAT GAATATAGAC TCATTGCTCG AGTTATATCC TGACCTCGAA 
GTGATTTGTA CACACTCAGC CCATAAATCT CTCTTTTGCC TTCGTCAGGC CTCAATAATT 
CATTGTCGTG GAAAAAAAGA ACTGGCAGAG AAGATAGAAA CAGCTAAATA TAGAATCCAT 
ACAACTTCTC CTAGTTACCC AATACTGGCT TCTTTGGATG CTGCGCAAGC AATGATGTCA 
GTAAAGGGGG AAATACTTGC TACACATACT CGCGAGTTAG TTCATGAATT TATTATGGGG 
GTATCTGATA TTGCTGGTCT GGGTGAAAAA TCGATTTGCA GGGAGGTATT CAATACACAT 
TGGCATATTC AGTATGACCC AACCAAAATT ATGATCGATG TCAGCGCGTT AGGGACAGGT 
CAAGAAATAA AAACATTGCT CAGCGAACAT GATATATCTC TAAAGAGATT CATCAATAAT 
TTCATTCTTT TGAATTTTCA TATTGGTATT AATAGGGAAG CAATCCGCTG TCTTCTTTCT 
TCGCTAACAA AAATTAGCAA AGATAATAAG AACAATAAAG AAGAGAACGC AGTTGCCAAT 
AAATTCATTA TATCTTACCC ACCAGGTGTT CCTCTTGTTT TTCCTGGGGA TGTTATTAGC 
AAAGACGTTA GAAATAAAAT AAATGAATGT AAACGGAATG GCTGCCTAAT TATTGCTGCC 
TGA
 
Protein sequence
MNAKIVKMKE NTPVLAGLKR LCHRKMYSFH ALPISSHGQS DIVGDTREFL SECLEGSATG 
ELFDNFFFPH GIIAESQKLT AKLYNADASF YITSGTSTSN QIAITALFEK GQRILIDKNC 
HQSIHFHAQA IGAEVRYLCP DLQTMDQEIS AWSYAHLENT LLSLQNEGKG CDIVILTAQS 
YEGIIYDIPQ VLAHLLSAGV QARKFFIDEA WGSLNYFSED TRQLTAMNID SLLELYPDLE 
VICTHSAHKS LFCLRQASII HCRGKKELAE KIETAKYRIH TTSPSYPILA SLDAAQAMMS 
VKGEILATHT RELVHEFIMG VSDIAGLGEK SICREVFNTH WHIQYDPTKI MIDVSALGTG 
QEIKTLLSEH DISLKRFINN FILLNFHIGI NREAIRCLLS SLTKISKDNK NNKEENAVAN 
KFIISYPPGV PLVFPGDVIS KDVRNKINEC KRNGCLIIAA