Gene SeSA_A1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1571 
Symbol 
ID6519492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1515270 
End bp1516970 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content57% 
IMG OID642746683 
Productputative amidohydrolase family 
Protein accessionYP_002114486 
Protein GI194737712 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0884579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGTC TCGTCCCGTC TCTGATTTCC AGAACCGCGC TTCTCTTTCT GCTCACGGCC 
ACAGGCGCAG CCACCGCCGC CCGCCCGGCA GCGGATATTA TTTTGCATAA CGGTAATATC
ATCACTCTGA ATGATGCCCA GCCGCAGGCC AGCGCGCTGG CGATTTCCGG CTCGCGGATT
GTGGCGATTG GCGGTGATAC GGCGACAAAT GAATGGCGCG GCGACCATAC CCGTACCATC
GATTTACAGG GTAAAACCGT GATACCCGGC CTGACCGATA CCCACATTCA CGCCATTCGC
GGCGGACAAA CCTGGACATT CGAAACCTAC TGGTACAACA GCCCTTCGCT TAAAGACGCG
CTGGATAAAT TACGCGCCGA CGCTAACCGT CGTCCCCGCG ATCAATGGGT AGCCGTAGTG
GGATCGTGGA TACCGGCACA ATTTGCAGAA AACCGGGCGC CGACGGTAGC CGAACTGAGC
CACGCCCTTC CCGATCATCC GGCTTATATT CAGTATCTTT ACGACTATGC GTTAGTGAAT
CAGCGCGGTA TAGACGTACT TGGCCTTAAC GACACCCCTC CTCCTGATTT AGCGGGAATC
CGCGTAGAGC GCGACACAAA AGGTAGCGCC ACGGGGAAAT TATTTGGTGA CATCGCCGCG
TTTAACCAGC TTTTTGCCAG CATAAGTAGT AACGCCGATC GCGAGGGCGG TCTGCGACAA
TTTTTCGCTG ATATGAACGC TCGCGGCGTG ACCGGCATCA TTGACCCCTC TGCCGGGCCT
GCCGCCGCTT ATGAGCCTTT ATTTGCAATG CGAAACCAGG GGGATTTACC GCTGCGCGTG
GGGTATCGCA TTCCGGTACA GCCGGAAGCG AAAGGTCATG AAGCGCAGTG GTTCAGCAAC
CTGATGGCCT TTCGCCCGGC GCGTGCCGAT GACGGACAAC TGGCTTTTCT TGGCCTGGGG
GAAAGCCTGG TGGCCGGAAT GAATGACGGC GTGCGGATGG CCCCAGGATT TTCTTCCTCA
GAGCAGGATA AAACCGCGCT TCGCCAGGTC GCGACGTTTG CGGCAAAACG GGGAATACCG
CTTGAGATCC ACGCCTATAC CGATGACAGC GCCGACGCGA TATTGACGAT TTTTGAGCAG
GTAGCGCAGC AGTACGATCT GCGTCCTCTC CGCTGGTCTA TTGCGCATCT GAATACCGGT
TCGCCACAGA CGCTTGAGCG AATGCGTAAG CTGGGCCTGG CATACACTGT GCAAATGGGG
CCTTACTTTG AGGGGCTTGC CATCCGTGAC GCCAATCCAC CCGGCGCGAC GGACAATTCG
CCGCCGGTTC GACTGGCGCT GGATAAAGGG CTTGTCGTAG CTGGCGGTAC CGATTCGACG
CGTATTGGCA TTGCCGGTGT CTGGCACGCT ATCGAATATC ATATCACCGG TATAGCGTCA
GGCGGTTCCG TACGTAAACC CGCCAGCGAG CGGCTCACGC GTCTGGAAGC GCTAGCGTTA
TATACACGTC ATGCCGCCTG GCTCGCCTTT GCCGAACAAC ACCGGGGCCA GCTTAGCGTC
GGAAAACAGG CCGATCTGGC GGTACTCAAT CAGCCATTTA TGACGATGCC CGAAGACAGA
ATTGATACCA TTCGCGCTGT TTTGACGCTT GTCGATGGAC GCATTGTTCA CGAAAGTCCG
GACCTTAACG CCGGACAATG A
 
Protein sequence
MISLVPSLIS RTALLFLLTA TGAATAARPA ADIILHNGNI ITLNDAQPQA SALAISGSRI 
VAIGGDTATN EWRGDHTRTI DLQGKTVIPG LTDTHIHAIR GGQTWTFETY WYNSPSLKDA
LDKLRADANR RPRDQWVAVV GSWIPAQFAE NRAPTVAELS HALPDHPAYI QYLYDYALVN
QRGIDVLGLN DTPPPDLAGI RVERDTKGSA TGKLFGDIAA FNQLFASISS NADREGGLRQ
FFADMNARGV TGIIDPSAGP AAAYEPLFAM RNQGDLPLRV GYRIPVQPEA KGHEAQWFSN
LMAFRPARAD DGQLAFLGLG ESLVAGMNDG VRMAPGFSSS EQDKTALRQV ATFAAKRGIP
LEIHAYTDDS ADAILTIFEQ VAQQYDLRPL RWSIAHLNTG SPQTLERMRK LGLAYTVQMG
PYFEGLAIRD ANPPGATDNS PPVRLALDKG LVVAGGTDST RIGIAGVWHA IEYHITGIAS
GGSVRKPASE RLTRLEALAL YTRHAAWLAF AEQHRGQLSV GKQADLAVLN QPFMTMPEDR
IDTIRAVLTL VDGRIVHESP DLNAGQ