Gene SeSA_A1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1564 
Symbol 
ID6519886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1505566 
End bp1506594 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content58% 
IMG OID642746676 
ProductDNA-binding transcriptional repressor MalI 
Protein accessionYP_002114479 
Protein GI194737753 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.253156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCG CCAAAAAAAT CACTATCCAC GATGTTGCGC TGGCGGCTGG CGTGTCGGTG 
AGCACCGTTT CCTTAGTGCT GAGCGGCAAG GGGCGAATAT CGGCCGCGAC CGGCGAGCGC 
GTGAACGCGG CAATTGAACA ACTGGGTTTT GTGCGTAACC GCCAGGCGTC CGCGCTGCGT 
GGCGGGCAAA GCGGCGTTAT CGGTTTGATC GTGCGTGATT TATCGGCACC CTTTTATGCC 
GAATTGACCG CCGGGTTAAC GGAAGCGCTG GAAGCGCAAG GCCGTATGGT TTTTCTCCTG 
CACGGGGGGA AAGATGGCGA ACAGCTAAAT CAGCGTTTTA CCATGCTGCT TAATCAGGGC 
GTGGATGGCA TGGTGATCGC CGGTGCGGCG GGTAGTAGCG AAGCGCTGAG AGCGCAGGCC 
GACGCACAAG GAATTCCGGT GGTGTTTGCG TCACGCGCCA GCTATCTTGA TGATGCGGAT 
ACCGTTCGGC CTGACAACAT GCAGGCGGCG CAGCTCCTGA CGGAGTACCT TATTCGTCAG 
GGCCATCAGC GCATCGCCTG GCTGGGAGGA CAAAGCGCAT CTTTAACCCG CGCGGAGCGC 
GTGGGCGGCT ATTGCGCGAC GTTGTTAAAA TACGGTCTAC CGTTTCACAG CGAGTGGGTC 
GTGGAATGCG CTTCCAGTCA GAAGCAGGCA GCAGAAAGCA TTACCGCGCT GTTGCGATAC 
AATCCGACCA TTAGCGCTGT CGTTTGTTAC AACGAAACCA TTGCGATGGG GGCGTGGTTT 
GGCCTGCTGA GAGCCGGACG ACAGAGTGGC GAGAGCGGTG TCGATCGTTA TTTCGAGCAG 
CAGGTGTCGC TGGCGGCGTT TGCTGATGTG GCGGAGAACG CCCTCGACGA CCTGCCGATT 
ATCTGGGCCA GTACGCCGGC GCGAGAAATA GGCTATACCC TGGCCGAACG AATATTGCAG 
CGTATTGCTC ACGACGAGCA CCATGTGCGG AGTCAAACGA TAGCCGCTCG CCTGGTAACG 
CAAAAGTAG
 
Protein sequence
MAIAKKITIH DVALAAGVSV STVSLVLSGK GRISAATGER VNAAIEQLGF VRNRQASALR 
GGQSGVIGLI VRDLSAPFYA ELTAGLTEAL EAQGRMVFLL HGGKDGEQLN QRFTMLLNQG 
VDGMVIAGAA GSSEALRAQA DAQGIPVVFA SRASYLDDAD TVRPDNMQAA QLLTEYLIRQ 
GHQRIAWLGG QSASLTRAER VGGYCATLLK YGLPFHSEWV VECASSQKQA AESITALLRY 
NPTISAVVCY NETIAMGAWF GLLRAGRQSG ESGVDRYFEQ QVSLAAFADV AENALDDLPI 
IWASTPAREI GYTLAERILQ RIAHDEHHVR SQTIAARLVT QK