| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1514 |
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| Symbol | epaO |
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| ID | 6515334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 1461612 |
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| End bp | 1462580 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642746626 |
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| Product | type III secretion system protein |
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| Protein accession | YP_002114431 |
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| Protein GI | 194737381 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.32712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAGAA TAGTGAATGA AGAGCGTCCG TGGATGGAGA TGCTTCCAAC GCAAGGCGCT
ACCATTGGTG AGCTGACATT GAGTATGCAA CAATATCCAG TACAGCAAGG GACATTATTT
ACCATACATT ATCATAATGA GCAGGGTAGG GTGTGGATTG CAGAACAATG CTGGCAGCGC
TGGTGTGAAG GGTTAATTGG CACCGCTAAT CGATCGGTTA TCGATCCTGA ATTGCTATAC
GGAATAGCTG AATGGGGGCT GGCGCCGTTA TTGCAAGCCA GTAATGCCAC CCTTTGTCAG
AACGAACCGC CAACATCCTG CAGTAATCTA CCACATCAGC TAGCGTTGCA TATTAAATGG
ATAGTTGAAG AACATGAGTT CCATAGCATT ATTTTTACAT GGCCAACGGG TTTTTTGCGC
AATATAGTCG GAGAGCTTTC TGCTGAGCGT CAACAGATTT ATCCTGCTCC TCCTATTGTA
GTCCCTGTAT ATTCAGGCTG GTGCCAGCTT ACATTAATTG AACTTGAGTC TATCGAAATC
GGCATGGGCG TTCGGATTCA TTGCTTTGGC GACATCAGAC TCGGTTTTTT TGCTATTCAA
CTACCAGGGG GAATCTACGC AAGGGTATTG CTGACAGAGG ATAACACGAT GAAATTTGAC
GAATTAGTCC AGGATATCGA AACGCTACTT GCGTCAGGGA GCCCAATGTC AAAGAGTGAC
GGAACGTCTT CAGTCGAACT TGAGCAGATA CCACAACAGG TGCTCTTTGA GATCGGACGT
GCGAGTCTGG AAATTGGACA ATTACGGCAA CTTAAAACGG GGGACGTTTT GCCTGTAGGT
GGATGTTTTG CGCCAGAGGT GACGATAAGA GTAAATGACC GTATTATTGG GCAAGGTGAG
TTGATTGCCT GTGGCAATGA ATTTATGGTG CGTATTACAC GTTGGTATCT TTGCAAAAAT
ACAGCGTAA
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| Protein sequence | MLRIVNEERP WMEMLPTQGA TIGELTLSMQ QYPVQQGTLF TIHYHNEQGR VWIAEQCWQR
WCEGLIGTAN RSVIDPELLY GIAEWGLAPL LQASNATLCQ NEPPTSCSNL PHQLALHIKW
IVEEHEFHSI IFTWPTGFLR NIVGELSAER QQIYPAPPIV VPVYSGWCQL TLIELESIEI
GMGVRIHCFG DIRLGFFAIQ LPGGIYARVL LTEDNTMKFD ELVQDIETLL ASGSPMSKSD
GTSSVELEQI PQQVLFEIGR ASLEIGQLRQ LKTGDVLPVG GCFAPEVTIR VNDRIIGQGE
LIACGNEFMV RITRWYLCKN TA
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