Gene SeSA_A0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0967 
Symbol 
ID6518040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp939996 
End bp940670 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content53% 
IMG OID642746099 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002113910 
Protein GI194737243 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC CCACCACGAC CACCAAGGGC GAGCAGGCGA AAAGTCAGCT CATTGCCGCC 
GCGCTGGCGC AGTTTGGCGA GTATGGCCTC CATGCCACCA CGCGCGATAT CGCCGCGCTG 
GCGGGGCAAA ATATTGCCGC TATTACTTAC TATTTCGGCT CAAAAGAGGA TTTATACCTC 
GCCTGCGCCC AGTGGATTGC CGATTTTCTT GGCGAAAAAT TTCGCCCCCA TGCTGAAAAA 
GCGGAACGTC TGTTTAACCA GCCTGTCCCT GACCGGGACG CCATACGCGA GCTTATTCTG 
CTCGCCTGCA AGAACATGAT TATGCTGCTG ACGCAGGAAG ACACCGTTAA CCTGAGCAAA 
TTCATTTCAC GCGAGCAGCT CTCTCCCACG TCGGCCTATC AATTGGTTCA TGAACAGGTT 
ATCGATCCGT TGCACACCCA TCTGACAAGA TTGGTTGCCG CTTATACCGG CTGCGACGCC 
AATGATACGC GCATGATTTT GCATACCCAT GCCTTACTGG GCGAAGTGCT GGCGTTCCGT 
CTCGGCAAAG AAACTATTCT GTTACGTACC GGCTGGCCGC AGTTTGATGA AGAAAAAGCG 
GAGCTGATTT ACCAGACGGT AACCTGCCAC ATCGATCTTA TTCTGCACGG TTTAACGCAA 
AGGAGTCTGG ACTGA
 
Protein sequence
MNIPTTTTKG EQAKSQLIAA ALAQFGEYGL HATTRDIAAL AGQNIAAITY YFGSKEDLYL 
ACAQWIADFL GEKFRPHAEK AERLFNQPVP DRDAIRELIL LACKNMIMLL TQEDTVNLSK 
FISREQLSPT SAYQLVHEQV IDPLHTHLTR LVAAYTGCDA NDTRMILHTH ALLGEVLAFR 
LGKETILLRT GWPQFDEEKA ELIYQTVTCH IDLILHGLTQ RSLD