Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0880 |
Symbol | |
ID | 6515947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 853910 |
End bp | 854620 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642746014 |
Product | ABC transporter domain protein |
Protein accession | YP_002113830 |
Protein GI | 194737777 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.900741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.269412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCT CTTGCAAAAA CGTTGGCGTA ATACTCCCTA TATTTAACTC CAGCCACCGT TCATTTAAAA AAACTTTTTT ACAGGCTGCT TCAGGTGGAC GAATTGGCTC ATCGAATACC GGGGTTATTG AAGTAGAGGC ATTAAAAAAA ATTGATTTTA CGCTTACTGA AGGTAACCGT CTTGCGCTTA TTGGACACAA TGGTTCGGGC AAAACCACTC TTCTGAGAGT ACTTGCAGGG GCCTATAAAC CAACTTCAGG GAAGTATGAA TGTATCGGTC GAGTCACCAG CCTCATTGAT CCCATGATGG GAATGGATGG TGAGCTTACC GGCCTGGAAA ATATAAAACT GAGGGGACTA TTTCTCGGTC TGTCAAAAAA TGAAATAAAA AATATTACAG AAGATGTCAT CGAGTTCAGC GAGTTAGGTG ATTTTATTAA AATCCCCGTT AGAACGTATT CTAGTGGTAT GGTTCTGAGG CTTGGTTTTT CTATTTCTAC TGCAATTAAT CCTGAAATTT TACTGATGGA TGAATGGATG AGCGTGGGTG ATAGTGATTT TAAAAGAAAA GCAGAGATGA GATTAAATAG CTTTATCTCT AAAGCGGGCA TTATGGTAAT GGCCACTCAC GATGATGAAC TGGCTAAATC TGTATGTAAT AAGTTCATCA GGCTTGAGCA CGGTGAGATA GTTAGCAAAG GTGGATTTTA A
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Protein sequence | MKISCKNVGV ILPIFNSSHR SFKKTFLQAA SGGRIGSSNT GVIEVEALKK IDFTLTEGNR LALIGHNGSG KTTLLRVLAG AYKPTSGKYE CIGRVTSLID PMMGMDGELT GLENIKLRGL FLGLSKNEIK NITEDVIEFS ELGDFIKIPV RTYSSGMVLR LGFSISTAIN PEILLMDEWM SVGDSDFKRK AEMRLNSFIS KAGIMVMATH DDELAKSVCN KFIRLEHGEI VSKGGF
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