Gene SeSA_A0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0652 
Symbol 
ID6516424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp633384 
End bp634022 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content44% 
IMG OID642745795 
Productgp30 
Protein accessionYP_002113618 
Protein GI194735697 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0371314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.0000154147 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATATTG TAGCAAAATC AGATTACAAC TTCCAAGGAT TCGCTTTTAA TCCTGTGACA 
GAAGGCGGTT CTATTTGGTT TACCTCCACT GAACTAGCTA AGGCCCTCGG CTACAAAAAA 
ACCGATGCCA TCAGCCAGAT TTATGCTCGT AACGCCGATG AATTTTCCGA CTCTATGTCG 
TTGACCCTCA ATATGAAGGT CAACGGGATA AACAATAGCT TACGTAACAA ATCGGTCAGA 
GTTTACTCAC TCCGAGGCGC TCACTTGGTG GCGATGTTTG CTTCTACGCC CAAGGCCAAA 
GAGTTCCGCC GTTGGGTGCT GGATATTTTG GATCGGCAGG CAGAATGCTC ACCGATTGCA 
AAACAGTTTA CTGACGAAGA GCTGGTCAAT CTCTGCTACT TACAATTGTG GATGGAGAAG 
AGTCAACAAA TGTGCAAACA CATCTATCCA GGAATGAAGC AAATTGGTTC TGAGCTTTCA 
GGAAGGATTT ACGATATTGC ATATGAGACT CGCTACATGT CAGAAGAAAC CAAGAAATCA 
CTTCTTCGTG AAATGAAGAA TCTTGATACC AACAATTTTG TCGTAAAGAA CGCTCAGCCA 
ATGCTGGCAA AACTGCGCGG CGAGGAATGG ATTCATTGA
 
Protein sequence
MNIVAKSDYN FQGFAFNPVT EGGSIWFTST ELAKALGYKK TDAISQIYAR NADEFSDSMS 
LTLNMKVNGI NNSLRNKSVR VYSLRGAHLV AMFASTPKAK EFRRWVLDIL DRQAECSPIA 
KQFTDEELVN LCYLQLWMEK SQQMCKHIYP GMKQIGSELS GRIYDIAYET RYMSEETKKS 
LLREMKNLDT NNFVVKNAQP MLAKLRGEEW IH