Gene SeSA_A0345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0345 
Symbol 
ID6518961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp352648 
End bp353358 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content48% 
IMG OID642745497 
Productputative fimbrial protein 
Protein accessionYP_002113322 
Protein GI194734828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.146717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTA AAGATACTCT TCCCGGGGTG TTTCTCTGTG TCGCTATGTT TGCATGTGGT 
CATGCCAGGG CGAATATGCT CGTTTATCCC ATGGCGGCAG AAATTAATAG TAGCCGCGAA 
GAGGCCACCT CGCTGTTCGT CTATTCTAAA TCAGATCATG TGCAATATAT TCGAACAAGA 
ATCATGCGTA TTGAACATCC TGGTATGCCA CAGGAGAAGG AGGTACCAGC AGGGAATGAT 
ATAGAGACAG GACTTGTTGT CTCCCCGGAG AAATTTGCCC TTTCCCCGGG AACAAAAAAA 
ACAATACGTG TTATCAGTAC TCAGGCACCG GAAAGAGAGG AAGCCTGGCG GGTATACTTC 
GAGGCTGTTC CTGAACTGGA AGATGATCCA CAGGCAGGTG GAAAGCAAAA TTCATCCGTA 
AGTGTGAATC TTGTCTGGGG GGTGTTGCTG CGTGTTTCTC CGTCAGACCC CAGGCCTGCG 
CTGGTAACGA ACGGTCACCA CCTGCTGAAT ACGGGAAATA CCCGGCTTTC TCTTATTCGG 
GCCGGCAACT GCGACACCAC ATGCCACTGG CAGAATATAG ACAAAAGTAT TTATCCCGGC 
GGGAGTGCTG ATATTCCGGC CGGAATAAAA AGTAATGCAT TTCGTGTGGA ATATCGTACG 
GGTGCAAATT CACCGGTAAT CTCTGCTGAT TTAACAGCAG CCGGAAAGTA A
 
Protein sequence
MNFKDTLPGV FLCVAMFACG HARANMLVYP MAAEINSSRE EATSLFVYSK SDHVQYIRTR 
IMRIEHPGMP QEKEVPAGND IETGLVVSPE KFALSPGTKK TIRVISTQAP EREEAWRVYF 
EAVPELEDDP QAGGKQNSSV SVNLVWGVLL RVSPSDPRPA LVTNGHHLLN TGNTRLSLIR 
AGNCDTTCHW QNIDKSIYPG GSADIPAGIK SNAFRVEYRT GANSPVISAD LTAAGK