Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_B0124 |
Symbol | |
ID | 6515179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011092 |
Strand | + |
Start bp | 103389 |
End bp | 105296 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642745168 |
Product | mobilization protein |
Protein accession | YP_002113000 |
Protein GI | 194733778 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.795434 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATATTCG ACAAACTGAA TCATTTGCTG TCGCCGATAG CAAATGCCGT CCTGGCCTTT ATCGCCTTTT TGCAGGCGCA TCAACTGGCG TTAGCGCTGC TGTCCGGCGT CATGCTGCCT TTTATATTTT CTGCGAAACA CGGCGGTCAG GAAAAGCCGA CGTTTCTGCA AAGGATCTTA ATTCTGCTTT CCATGATCTG TTTTGTTTTC GGCTCGATAG CGCCAGTGGC CGTCTGGTTT TTACAGCGCA TTTATGGCCG GGAAGATATC GCCAGTCCGC CGCTGCTTAC CTGGACAATG GCGCTACTGT TTACCGTCGC CGGTTTTATT CTGCACGTGG TTTTACGGCG TTTGATCTCG CCTGAATTTG ATAAGGTCAA ATGCGGCATG GTGAAAAAAA CCAGCATGGA GCGCGACCGC AGAACCGACG TTCGCCGGGT AAAAGAAATT TTACCCGTCA CCACAGAATA CGATCCGATG GATTACATCG ATCTGAATAA GGGGATTTTT ATCGGGCTGA GCCGCGAGGG TGAGCCGCAA TATATTCCGT TAAAAGAATG GCAGACCCAG CACGCCGACA TTATCGGCAC CACTGGTGCC GGTAAAGGCG TCGTAACCGG TATTCTGCTT TATCAGAGCA TCCTCGCCGA CGAGGGCGTT TTTGTTCTCG ACCCCAAAAA CGACGAGTGG GCACCGCACC TGTATAAAAA AGCGTGCGCG GACGCCGGAA AACCCTTTGT GCTTATCGAC CTGAATAAAC AGGAATACCA GATGAACCTT ATCGACGGTA TCACCGCCGA CCATCTGGAG GAATTATTCG TGGCCGGTTT CAGTCTGGCG GAAAAAGGCG AGGCGGCGGA TTTTTACCGT ATCGACGACC GCAAGGCGGC GAGAACGGCG GCGCAGTTCG TGAAGGATAA TCCGGGCGCA ACCGTGCGGG ATATTTATAA CGGCGATTAT GTTCAGGGCA TTGGCGAGAC GATTAAAGCC TTTCACGGTA AAACCGAGGA GCTGGCAATG CTCAACAGCA TTAACGCGCC AGGCGGTTTT GCGCTGAAGG AGATTTTCGA CAAGGGCGGC TGCTGCTATA TCATCGGTTC GATGCGTAAC TCTAAAATCA TTACCGCGCA GCGCATGATT TTAGTTCGCC TGTTCCAGCT CGCGGAATTG CGCGACCGCG TCGCGGGGAA TATCCGCCCC ATCGCCATCT TTAAGGACGA GGTGAAATAT CACCTGTCCA AACCGGCGCT CGAAGGGTTA GGCGCGGCAC GCGATAAAGG CGTCCATATA TTAATGGCGC ACCAGTCAAT TGCCGACCTG CGCGACTGTC CGGCGGATTT AAACGGCGAC GCCGTGGTTG GGGCGGTTGT GGAAAACTGC AAGTTTAAGC TGGTATATAA ACTTCAGGAT CCAGACACCG CCGAATGGAT TGCGCGCATG TCGGGCACGA TTTTAGTCGA TGATGAAAGC CGGAAAGTCA CCACCACGGC GGTGCTGACA GAAAAAGTCG ATAACGAGCG CATGCTTCGG CAGGCGGAAA GCTATTACAT CGACAGCAAT ATGCTCCAGA ACCTGCCGAA GTTCGTCAGC TATATCTTCA GCCAGAACGC GCTCGCGTTC CCGTCGTTAA TCTCACCGCT CAAGGTTAAA AAAGCCCCAC TGGAGCTGTT TACCCTGCCG CCGGTCGCAG TCGCTACGGT GGCAGAAGTT AAACCGGTGC TGGATCTGGA TTTTGATAAA ACGGCTCCGG CAGTTCCGGC ACCTGACATT ATTCCGGTCA GCGCAACAAC CACCAAAAAA CCCTCAGCAA CGCCAATACC CACTCCGCCG GTGCAACCTG ACGAGGAGTG GCTGATGGCA TCACAGCCCG CTCCAAATGA CGAAATACAT TCGTTGCTGG ATTTATAA
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Protein sequence | MIFDKLNHLL SPIANAVLAF IAFLQAHQLA LALLSGVMLP FIFSAKHGGQ EKPTFLQRIL ILLSMICFVF GSIAPVAVWF LQRIYGREDI ASPPLLTWTM ALLFTVAGFI LHVVLRRLIS PEFDKVKCGM VKKTSMERDR RTDVRRVKEI LPVTTEYDPM DYIDLNKGIF IGLSREGEPQ YIPLKEWQTQ HADIIGTTGA GKGVVTGILL YQSILADEGV FVLDPKNDEW APHLYKKACA DAGKPFVLID LNKQEYQMNL IDGITADHLE ELFVAGFSLA EKGEAADFYR IDDRKAARTA AQFVKDNPGA TVRDIYNGDY VQGIGETIKA FHGKTEELAM LNSINAPGGF ALKEIFDKGG CCYIIGSMRN SKIITAQRMI LVRLFQLAEL RDRVAGNIRP IAIFKDEVKY HLSKPALEGL GAARDKGVHI LMAHQSIADL RDCPADLNGD AVVGAVVENC KFKLVYKLQD PDTAEWIARM SGTILVDDES RKVTTTAVLT EKVDNERMLR QAESYYIDSN MLQNLPKFVS YIFSQNALAF PSLISPLKVK KAPLELFTLP PVAVATVAEV KPVLDLDFDK TAPAVPAPDI IPVSATTTKK PSATPIPTPP VQPDEEWLMA SQPAPNDEIH SLLDL
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