Gene SeSA_B0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0072 
Symbol 
ID6515127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand+ 
Start bp63612 
End bp65252 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content61% 
IMG OID642745119 
Producttransposase 
Protein accessionYP_002112951 
Protein GI194733792 
COG category[L] Replication, recombination and repair 
COG ID[COG4644] Transposase and inactivated derivatives, TnpA family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.520579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.363066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATCAT CCTTCGACTG GCGCTTCAGC TTTTCGGCAA TGGTATTCAA AATCATCGGC 
TCGCTCCGCA ATATCAGGAG CGGCAACTTC TCTCCCCATG GTCAACATCG AGTTAACCTG 
AAGAATTTGC GACAAGGCCA TGCGTTCCGC TCCGGAGATG TCTGGCTTAC TAGGTCCCGG 
CGCTATGGCG ATCTGAAACA CGCACTCGTT CCGGCACAAT CCATCGCGGA AGGCGGTCGT 
CTCGCTGTGC CATTGCGGCC GGAGGAATGG CTGGCAGACC GGCAAGCTCG CCTCGACATG 
CGGTTGCGCG AGCTTGGCCG TGCCGCTCGC GCAGGCACGA TCCCGGGCGG GTCGATTGAA 
AACGGCGTTC TGCATATCGA GAAACTCGAA GCCGCCGCGC CGACAGGCGC CGAAGATCTG 
GTGCTCGATC TCTACAAGCA GATCCCGCCC ACGCGCATCA CCGATCTCCT GCTGGAGGTG 
GATGCGGCGA CCGGCTTCAC CGAAGCGTTC ACCCATCTGC GCACAGGAGC ACCCTGCGCT 
GACCGGATCG GGCTAATGAA CGTTATCTTG GCGGAAGGGA TCAACCTCGG CTTGCGCAAA 
ATGGCGGATG CGACAAACAC CCACACCTTC TGGGAATTGA TCCGCATTGG ACGGTGGCAT 
GTCGAGGGCG AAGCCTATGA CCGGGCGCTG GCCATGGTGG TCGAGGCACA GGCAGCGTTA 
CCCATGGCCC GGTTCTGGGG CATGGGCACG TCGGCTTCGA GCGACGGACA GTTCTTCGTC 
GCTACAGAGC AAGGTGAGGC CATGAACCTG GTCAACGCGA AATATGGCAA TACCCCGGGC 
CTGAAAGCCT ATAGCCACGT CTCCGACCAA TATGCGCCGT TCGCAACCCA GGTGATTCCT 
GCAACGGCAA GCGAAGCGCC TTACATCCTC GATGGCCTGC TGATGAACGA TGCTGGACGC 
CATATCCGCG AGCAGTTCAC CGACACGGGC GGCTTCACCG ATCACGTCTT TGCCGCATGT 
GCCATTCTCG GCTACCGGTT CGCTCCGCGC ATCCGCGACC TGCCATCCAA ACGGCTCTAC 
GCGTTCAATC CGTCGGCCGC CCCGGCGCAC CTGCGAGCGT TGATCGGCGG AAAGGTCAAC 
CAAGCCATGA TCGAGCGCAA TTGGCCCGAC ATCCTGCGCA TCGCCGCCAC CATTGCTGCC 
GGGACCGTCG CGCCAAGCCA GATTCTGCGG AAACTCGCCT CCTATCCGCG GCAGAACGAG 
CTCGCGACAG CCCTGCGGGA AGTCGGTCGC GTCGAGCGCA CCCTGTTCAT GATCGACTGG 
ATTCTGGATG CCGAACTCCA ACGGCGTGCC CAGATCGGGC TCAACAAAGG CGAAGCTCAT 
CATGCGCTGA AGCGGGCAAT CAGCTTCCAC CGCCGCGGTG AAATCCGCGA CCGTTCCGCC 
GAAGGCCAGC ATTACCGCAT CGCCGGCATG AATCTGCTCG CCGCCATCAT CATCTTCTGG 
AACACCATGA AGCTCGGCGA GGTCGTTGCA AACCAGAAAC GCGATGGAAA GCTGCTATCG 
CCCGATCTCT TGGCCCATGT TTCGCCGCTC GGATGGGAAC ACATCAATCT CACCGGAGAA 
TATCGCTGGC CAAAGCCTTA G
 
Protein sequence
MKSSFDWRFS FSAMVFKIIG SLRNIRSGNF SPHGQHRVNL KNLRQGHAFR SGDVWLTRSR 
RYGDLKHALV PAQSIAEGGR LAVPLRPEEW LADRQARLDM RLRELGRAAR AGTIPGGSIE 
NGVLHIEKLE AAAPTGAEDL VLDLYKQIPP TRITDLLLEV DAATGFTEAF THLRTGAPCA 
DRIGLMNVIL AEGINLGLRK MADATNTHTF WELIRIGRWH VEGEAYDRAL AMVVEAQAAL 
PMARFWGMGT SASSDGQFFV ATEQGEAMNL VNAKYGNTPG LKAYSHVSDQ YAPFATQVIP 
ATASEAPYIL DGLLMNDAGR HIREQFTDTG GFTDHVFAAC AILGYRFAPR IRDLPSKRLY 
AFNPSAAPAH LRALIGGKVN QAMIERNWPD ILRIAATIAA GTVAPSQILR KLASYPRQNE 
LATALREVGR VERTLFMIDW ILDAELQRRA QIGLNKGEAH HALKRAISFH RRGEIRDRSA 
EGQHYRIAGM NLLAAIIIFW NTMKLGEVVA NQKRDGKLLS PDLLAHVSPL GWEHINLTGE 
YRWPKP