Gene SeSA_B0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0030 
Symbol 
ID6515115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand- 
Start bp27048 
End bp28868 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content65% 
IMG OID642745078 
Producttransposase 
Protein accessionYP_002112910 
Protein GI194733886 
COG category[L] Replication, recombination and repair 
COG ID[COG4644] Transposase and inactivated derivatives, TnpA family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000301486 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.581594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGATTC GTCGCCGGCG GCGCATGTTC ATACTCTTCG CCGAGCGAAA AGTTGGGGAA 
CAGCACGCGC CGGCCGCGCA AGGCGTGCTG GCAGCCGTGC AGACCCTGCG TGAGATGAAC 
GCCGACAACC TGCGCAAGGT GCCGGCCGAT GCACCCACGG CCTTCATCAA GCCGCGCTGG 
AAGCCGCTGG TGATCACCCC GGAAGGCCTC GACCGGAAAT TCTACGAAAT CTGCGCCCTG 
TCCGAGCTGA AGAACGCCCT GCGCTCCGGC GACATCTGGG TCAAGGGCTC GCGGCAGTTC 
CGCGACTTCG ACGACTACCT GCTGCCGGCC GAGAAGTTCG CCGCACTCAA GCGCGAGCAG 
GCCCTGCCCC TGGCGATCAA CCCGAACAGC GACCAGTACC TGGAAGAGCG TTTGCAGCTG 
CTGGACGAGC AGTTGGCCAC CGTCACCCGC CTGGCCAAGG ACAACGAGCT GCCCGATGCC 
ATCCTCACCG AGTCAGGGCT GAAAATCACC CCGCTGGATG CGGCGGTGCC GGATCGGGCG 
CAGGCGCTGA TCGACCAAAC CAGCCAGTTA CTGCCGCGCA TCAAGATCAC CGAACTGCTG 
ATGGACGTGG ACGACTGGAC GGGCTTCAGC CGCCACTTCA CCCACTTGAA GGACGGGGCC 
GAGGCCAAAG ACAGGACGTT GCTGCTGTCC GCAATCCTCG GTGATGCGAT CAACCTCGGG 
CTGACCAAGA TGGCCGAGTC GAGCCCCGGC CTGACCTACG CCAAGCTGTC CTGGCTGCAA 
GCCTGGCACA TCCGCGACGA AACCTATTCG GCGGCCTTGG CCGAGCTGGT CAACCACCAG 
TATCGCCACG CCTTTGCCGC CCACTGGGGC GACGGCACGA CCTCATCCTC CGATGGCCAG 
CGCTTCCGCG CGGGTGGCCG GGGCGAGAGC ACCGGGCACG TCAACCCGAA GTACGGTAGC 
GAGCCGGGAC GGCTGTTCTA TACCCATATC TCCGACCAGT ACGCGCCGTT CAGCACCCGC 
GTGGTGAATG TCGGCGTCCG CGATTCCACC TATGTGCTCG ACGGCCTGCT GTACCACGAG 
TCCGACCTGC GGATCGAGGA GCACTACACC GACACGGCCG GCTTCACCGA TCACGTCTTT 
GCCCTGATGC ACCTGCTAGG CTTCCGCTTC GCGCCGCGCA TCCGCGACCT CGGCGAAACC 
AAGCTGTACG TGCCGCAGGG CGTGCAAGCC TACCCGACGT TGCGCCCGCT GATCGGCGGC 
ACCCTGAACA TCAAGCACGT GCGTGCCCAC TGGGACGACA TCCTGCGCCT GGCCAGCTCG 
ATCAAGCAGG GCACCGTCAC CGCCTCGCTG ATGCTGCGCA AGCTCGGCAG CTACCCGCGC 
CAGAACGGAC TGGCCGTGGC CCTGCGCGAG CTGGGCCGGA TCGAGCGCAC GCTGTTCATC 
CTGGACTGGC TGCAAAGTGT TGAACTGCGC CGCCGCGTGC ATGCCGGCCT GAACAAAGGT 
GAGGCGCGCA ACTCGCTGGC CAGGGCGGTG TTCTTCAACC GCCTTGGGGA AATCAGGGAT 
CGGAGCTTCG AGCAGCAGCG CTACCGGGCC AGCGGCCTCA ACCTGGTGAC GGCGGCTATC 
GTGCTGTGGA ACACGGTGTA CCTGGAACGC GCCACCCAGG GGTTGGTCGA GGCCGGCAAG 
CCGGTGGACG GCGAGCTGCT GCAATTCCTG TCGCCGCTGG GCTGGGAGCA CATCAACCTA 
ACCGGCGATT ACGTCTGGCG GCAGAGCCGC AGACTGGAAG ACGGGAAGTT TCGGCCCTTA 
CGGATGCCCG GAAAACCTTA G
 
Protein sequence
MAIRRRRRMF ILFAERKVGE QHAPAAQGVL AAVQTLREMN ADNLRKVPAD APTAFIKPRW 
KPLVITPEGL DRKFYEICAL SELKNALRSG DIWVKGSRQF RDFDDYLLPA EKFAALKREQ 
ALPLAINPNS DQYLEERLQL LDEQLATVTR LAKDNELPDA ILTESGLKIT PLDAAVPDRA 
QALIDQTSQL LPRIKITELL MDVDDWTGFS RHFTHLKDGA EAKDRTLLLS AILGDAINLG 
LTKMAESSPG LTYAKLSWLQ AWHIRDETYS AALAELVNHQ YRHAFAAHWG DGTTSSSDGQ 
RFRAGGRGES TGHVNPKYGS EPGRLFYTHI SDQYAPFSTR VVNVGVRDST YVLDGLLYHE 
SDLRIEEHYT DTAGFTDHVF ALMHLLGFRF APRIRDLGET KLYVPQGVQA YPTLRPLIGG 
TLNIKHVRAH WDDILRLASS IKQGTVTASL MLRKLGSYPR QNGLAVALRE LGRIERTLFI 
LDWLQSVELR RRVHAGLNKG EARNSLARAV FFNRLGEIRD RSFEQQRYRA SGLNLVTAAI 
VLWNTVYLER ATQGLVEAGK PVDGELLQFL SPLGWEHINL TGDYVWRQSR RLEDGKFRPL 
RMPGKP