Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C5005 |
Symbol | |
ID | 6489465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 4884185 |
End bp | 4884730 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642745047 |
Product | putative fimbrial chaperone |
Protein accession | YP_002048616 |
Protein GI | 194450553 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTAATA AGAAAATTAT CATCCTGGCA ATGTTAACTG CCGTAGCATC CACACCGGTA TTTGCCCAGA ACACGATTAC GTTCAATGGC AAAATTTACG ATCAGGCGTG TACGGTTCAG GTTAATGGCT CCACGGATAC CACCATTGAT TTAGGTAATT ACAGCAAAGA ACGCATCGCG GAAAAAGGCG CCACAACCGA TTACGTGCCG TTTACCGTAA GCCTGGTTAG CTGCCCGGAA GCAGGAACTG GCGTACCAAC CCAGGCCATG TTCCGCTTCC ACGGCGCAAC AGATGATTCC AACCCAACGT ACTTCAAAAA CGCGGACGAA GGATCGGAAA CGGGCGCCGC GGGTGTCGGT ATTTCTATTC AGAACGCTTC ACATAGCGAT GTGACAGATA ACACGGATGA TGCCGCAGTA AACCTGCCAA CCGACGGCTC GACAGCAGAC TTTACCTATT ACGCCGCCAT GGCAAACGAT GGTTCCGCAA CCGTAACCGG TGGAGATGTT AGCACTCAGG TTACGTATAC CGTTTCGTAT CAGTAA
|
Protein sequence | MFNKKIIILA MLTAVASTPV FAQNTITFNG KIYDQACTVQ VNGSTDTTID LGNYSKERIA EKGATTDYVP FTVSLVSCPE AGTGVPTQAM FRFHGATDDS NPTYFKNADE GSETGAAGVG ISIQNASHSD VTDNTDDAAV NLPTDGSTAD FTYYAAMAND GSATVTGGDV STQVTYTVSY Q
|
| |