Gene SeHA_C4629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C4629 
Symbol 
ID6490252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp4520450 
End bp4521139 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content53% 
IMG OID642744699 
Producttetratricopeptide repeat protein 
Protein accessionYP_002048276 
Protein GI194448572 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value0.755709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAC TTCTTGCATT GATGTTGTTT ATGACATTCT TTGCCCATGC CGCAGATCCT 
GAGCCGGGTA GCCAGTATTT GCAGGCAGCA GAGGCAGGTG ACAGACGCGC ACAATATTTT
CTGGCCGACA GTTGGTTGAG CTATGGCGAT TTGAACAAAG CTGAATACTG GGCGCAAAAA
GCCGCCGACA GTGGCGACGC CGACGCCTGC GCGCTACTGG CGCAAATCAA AATCACTAAT
CCGGTAAGCC TGGATTATCC CGACGCGAAA AAGCTGGCTG AAAAGGCGGC TAACGCGGGC
AGTAAAGCGG GAGAAATTAC GCTGGCGCGG ATCCTGGTCA ACACCCAGGC CGGGCGCCCG
GACTACCCAA AAGCCATCTC GCTGCTGCAA AAGGCCTCTG AAGATCTGGA TAACGACTCC
GCGGTGGATG CGCAAATGTT GCTTGGCCTG ATTTACGCCA ACGGCGTGGG CATTGCCGCC
GATGATGAAA AAGCCGCCTG GTATTTCAAA CGCAGTTCCG CCATTTCCCG TACCGGCTAT
TCAGAATACT GGGCGGGAAT GATGTTTTTA AACGGTGAAC CGGGCTTTAT TGAAAAGAAT
AAGCAGAAGG CGTTGCACTG GTTGAATCTA AGCTGTCTGG AAGGGTTTGA TACCGGTTGC
GAAGAGTTCG AAACGCTAAC GAATGGCTGA
 
Protein sequence
MKLLLALMLF MTFFAHAADP EPGSQYLQAA EAGDRRAQYF LADSWLSYGD LNKAEYWAQK 
AADSGDADAC ALLAQIKITN PVSLDYPDAK KLAEKAANAG SKAGEITLAR ILVNTQAGRP
DYPKAISLLQ KASEDLDNDS AVDAQMLLGL IYANGVGIAA DDEKAAWYFK RSSAISRTGY
SEYWAGMMFL NGEPGFIEKN KQKALHWLNL SCLEGFDTGC EEFETLTNG