Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C4378 |
Symbol | |
ID | 6489068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 4264112 |
End bp | 4264960 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642744462 |
Product | transcriptional activator RhaR |
Protein accession | YP_002048051 |
Protein GI | 194451530 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAAATC AGTTAATCCT TTTGAAAAAA GATTTTTTTA CTGATGAGCA GCAGGCCGTT ACGGTTGCCG ATCGCTATCC ACAGGATGTT TTTGCGGAAC ATACGCATGA GTTTTGTGAA CTGGTGATGG TCTGGCGGGG CAATGGCCTA CACGTTCTTA ATGAGCGCCC ATACAGAATT ACCCGCGGCG ATCTGTTTTA CATTCGTGCT GAAGACAAAC ACTCCTATAC TTCCGTTAAC GATCTGGTGC TGCAAAATAT TATTTACTGC CCGGAGCGTT TGAAACTCAA TGTAAACTGG CAGGCGATGA TTCCCGGCTT TCAGGGAGCG CAGTGGCATC CTCACTGGCG GCTGGGCAGT ATGGGAATGA ATCAGGCGCG GCAGGTCATT AACCAGCTTG AACATGAGAG TAATGGACGC GATCCGCTGG CGAATGAGAT GGCGGAATTG CTGTTTGGTC AACTGGTAAT GACGTTAAAA CGGCATCGCT ACGCGACCGA CGATCTTCCG GCAACCTCCC GAGAAACCCT GTTGGATAAA TTAATTACCG CTTTGGCTAA TAGCCTTGAG TGTCCCTTTG CGCTGGATGC GTTTTGCCAG CAGGAACAAT GCAGCGAGCG GGTGCTGCGG CAGCAGTTTC GCGCCCAAAC CGGGATGACG ATTAATCAAT ATTTACGCCA GGTCCGTATT TGCCACGCGC AGTATCTGCT TCAGCATAGC CCGCTGATGG TTAGCGAGAT TTCGATGCAG TGCGGTTTTG AAGATAGTAA TTATTTTTCA GTGGTGTTCA CGCGGGAAAC CGGGATGACG CCGAGCCAAT GGCGTCATCT CAGTAATCAA AGCGATTAA
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Protein sequence | MANQLILLKK DFFTDEQQAV TVADRYPQDV FAEHTHEFCE LVMVWRGNGL HVLNERPYRI TRGDLFYIRA EDKHSYTSVN DLVLQNIIYC PERLKLNVNW QAMIPGFQGA QWHPHWRLGS MGMNQARQVI NQLEHESNGR DPLANEMAEL LFGQLVMTLK RHRYATDDLP ATSRETLLDK LITALANSLE CPFALDAFCQ QEQCSERVLR QQFRAQTGMT INQYLRQVRI CHAQYLLQHS PLMVSEISMQ CGFEDSNYFS VVFTRETGMT PSQWRHLSNQ SD
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