Gene SeHA_C3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3377 
Symbol 
ID6492107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3284550 
End bp3285473 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content47% 
IMG OID642743510 
Productputative xylanase/chitin deacetylase 
Protein accessionYP_002047125 
Protein GI194450902 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATATT TAAAATTACC TGAGGGTAAA AGGATTGCGG TCAATCTTGG TGTTGATGTA 
GATGCTCAGT CTTTATGGCT GGGCGGATTT AATCGACCGT CGCCATCCTT TATGTCACGA
GGAGAGTTTG GTGCTCAAGT TGGCGTACCA AGGCTTCTGA AATTGTTCAA AGAAAATAAT
ATCAAAACCA CCTTTTTTAT TCCCGGACAC ACTGTAGACA CCTTCCCGGA AATCATTAAA
GCAATTTTTG ATGCCGGGCA TGAAATCGCT CACCATGGCT ACTATCATGA AAATCCGACG
CTGGTGAATC GTGATACAGA ACGCCGACTT ATGGATCTGG CGTTCGCCTG TTATAAAAGA
CATTTCGGCA TACGCCCTGT GGGATACCGT TCTCCCTATT GGGATTATAG CGAGAATACG
CTGGATCTTC TGGAGGAAGC CGGTTTTCTC TATGACAGTA GCCTGATGGC GAGAGATCTT
GTGCCTTACC ATCCTCAACG TTGGCAGGTG AATTGGGAGA CGGGAAATAT CGCAGGCCCG
GCCAGCGCGA TTCTGGAAAT TCCTGTTAGC TGGTATCTGG ATGATTTTCC CGCACTGGCG
TATACCGGCA ACCAGGAGGG GATGAGCGAT ACTGACGGTG TTCTGCGACG CTGGAAGGAT
ATTTTTACCT ATGCTTATCA CCATCAGGAA AACAGTTTAT ATGCGATGGC TCTTCATCCG
CAGATAATCG GTCATGGGCA TCATATGATG ATGTTGTTAC GTTTGATTGA ACATATTAAA
GGGCATGATG GCGTATGGTT TGCAACCTGT GAAGAGATAG CCAGTGTCTG GGTGGATGAC
GAAGAGGATC GACAAAAAAT GCTCCGTCCT GATGTTCGTG GCGTAGCGCC GGTTCCGGAT
GATTATGGCT GGCCGGGCAA ATGA
 
Protein sequence
MGYLKLPEGK RIAVNLGVDV DAQSLWLGGF NRPSPSFMSR GEFGAQVGVP RLLKLFKENN 
IKTTFFIPGH TVDTFPEIIK AIFDAGHEIA HHGYYHENPT LVNRDTERRL MDLAFACYKR
HFGIRPVGYR SPYWDYSENT LDLLEEAGFL YDSSLMARDL VPYHPQRWQV NWETGNIAGP
ASAILEIPVS WYLDDFPALA YTGNQEGMSD TDGVLRRWKD IFTYAYHHQE NSLYAMALHP
QIIGHGHHMM MLLRLIEHIK GHDGVWFATC EEIASVWVDD EEDRQKMLRP DVRGVAPVPD
DYGWPGK