Gene SeHA_C2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2386 
Symbol 
ID6489417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2294685 
End bp2295215 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content43% 
IMG OID642742570 
Productfimbrial protein 
Protein accessionYP_002046205 
Protein GI194450223 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.632463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT CACTTATTGC TGCTTCTGTA TTGTCTGCTG TATTTATGAG CGCTGGGGTT 
TTTGCTGCTG ATGAGTATGA TTCAGGCGTT CTGAATATTA ACGGAAAGGT GGTTGGTACT
ACCTGTCAAT TTTTGGGTAC GAACACCGCT GAAATTAGAC TGAATGAAAT TGGTGCGGAT
AAAATAATTA ATTTAACCCC GGGTCAGATT TATGACGCAG TAACTAATCA AACTCAGATG
CCGTTGAAAA TAAAATGTCA ACAGGGTGTA GCGCCGCGTA TTACCTTCTC TTCAACGCAA
TTTGACAGCC ACGATATCAC ATTTAATAAC GGGTCTGCCA AAGGTGTCGG TTTTGCGGTT
TACTACGGAA GTACGGATAA TCAGATTGAT CCAGAGACGG GGGTGACACT AGCTCCAAAT
AGCAGCGGTG AATACGACCT GACTTTTTTA GCACGCTATG CGCGTTTAGA CGGTGATGTT
GCTTCTGGTG ATGTTAGCTC AACACTGACT TTAACGGTTG TTACTGACTA A
 
Protein sequence
MKRSLIAASV LSAVFMSAGV FAADEYDSGV LNINGKVVGT TCQFLGTNTA EIRLNEIGAD 
KIINLTPGQI YDAVTNQTQM PLKIKCQQGV APRITFSSTQ FDSHDITFNN GSAKGVGFAV
YYGSTDNQID PETGVTLAPN SSGEYDLTFL ARYARLDGDV ASGDVSSTLT LTVVTD