Gene SeHA_C2204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2204 
Symbol 
ID6491775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2117363 
End bp2119075 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content54% 
IMG OID642742398 
Productcellulose synthesis regulatory protein 
Protein accessionYP_002046038 
Protein GI194449982 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.315572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value0.912149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCACG AAACACTGTT AGACAATCAA GGCTGGTTTA AAAAGCTGGC GCGGCGTTTT 
GGTCCCGGTC ATGTCGTCAA CACCTGTTTT CTGATCGTGA TGCTGTTCTC GACGCTACTT
ACCTGGCGGG AAGTGATGAT ACTGAAAGAC GCGTATGTCG CCAGTCAGCG CAATCATCTG
GGGAGCGTCG CGAATGTCCT TGACCGCCAA CTGCAATTCA ACATGGACAG GTTGATCTTT
TTACGCAACG GTATGCATGA AGCGCTGGTG GCGCCGCTGG CTTTTTCCGC ATTGCAGAGC
GCGGTGACGC AGTTTGAGCA ACGACGCGTC AGACATTTCT GGCAACTGGA GCTGGATAAG
CGGCGGACAT TGCCGTTATA TGGCGTTTCC GATCAATTTG TCGCCCGGAC GACGCTTCTT
TCGCGGGAGA GTCGTGACCT GGCAAATGAA TTAACCGCCA CGCTGGAGTT AGGGTATCTG
GCGCGTCTGG CGCGCTCATC CGCCATGCTG ACGCTGGAGA CGATGTATGT TTCTCGCTCA
GGGTTTTACC TCTCAACTCT CCCTACGGCG TACGGTAGCG ATATTGTCTC CCGTTACTAT
CAGTACGTGA CTCAGCCCTG GTTTATCGAG CAAAGCCAAC GGCGTAACCC ACAGCGCGGC
GTGCGGTGGT TTACCTCCGC ACAGCCCTAT GTTGCTGACG AGCAGAAAAA AGTGACAGCC
AGTCTACCGC TGGATCACGA TAATTACTGG TATGGCGTAC TGGCAATGGA TATTCCCGTC
GCGTCATTAC AGCGGTTCCT GCGCGATGCG GCCGAAAAGG ATATTGAAGG GGAATATCAG
CTATACGATA ACCATCTCCG TTTGTTGACG GACTCCGCGC CGGAACAACA AACCGCGAAT
ACGTTAAATG ACCGTGAGCG CGCCTTACTG GCGCGTGAAA TAGAAAAAGA TACCCTGGGC
GGGCTGCGTT TAGGAACGCA TTATGTAAGC TGGGAGCGGC TGGATCATTT TGATGGCGTC
CTGCTGCGCG TGCATACACT ACGTGAAGGC ATCCAAGGGA ATTTTGGCAG TATTAGTATC
GCGCTGACGC TGTTATGGGT GCTTTTTACG GCGATGCTGT TGATCTCCTG GGGCGTTATT
CGACATATGG TCAAAAACAT GTTTGTTCTG CAAAATTCGC TGCAATGGCA GGCATGGCAC
GATCCGCTGA CCCGGCTGTA TAACCGTGGC GCGCTGTTTG AAAAAGCGTC CAGGCTGGCA
AAGCGCTACC GGGAAGCCCG CCAGCCATTT TCTGTGATAC AGCTGGATTT AGATTATTTT
AAAAGCGTTA ACGATCGCTT TGGTCATCAG GCAGGCGATC GCGTGTTGTC CCATGCTGCT
GGGCTCATTG GCAGCACCAT TCGAGCGCAC GACATCGCCG GACGGGTAGG GGGCGAAGAG
TTTTGTATCG TGCTGCCCGG CGCGACGAAA GCGCAGGCGC TGCAGATTGC CGAACGCATA
CGCCAGCGCA TTAATGACAA AGAGATTCTG GTGACGAAAA GCACGACGCT TCGTATCAGC
GCGTCAATGG GGATCAGTAG CGCGGAGGAA TACGGCGACT ATGATTTTGA GCAGTTGCAG
TCGCTGGCCG ACAAACGGCT TTATTACGCC AAACAGTCCG GACGTAACCG TATTTGCGCC
AGCGACGCGA CTCAGGAGCG GGAAAAGAAA TAG
 
Protein sequence
MPHETLLDNQ GWFKKLARRF GPGHVVNTCF LIVMLFSTLL TWREVMILKD AYVASQRNHL 
GSVANVLDRQ LQFNMDRLIF LRNGMHEALV APLAFSALQS AVTQFEQRRV RHFWQLELDK
RRTLPLYGVS DQFVARTTLL SRESRDLANE LTATLELGYL ARLARSSAML TLETMYVSRS
GFYLSTLPTA YGSDIVSRYY QYVTQPWFIE QSQRRNPQRG VRWFTSAQPY VADEQKKVTA
SLPLDHDNYW YGVLAMDIPV ASLQRFLRDA AEKDIEGEYQ LYDNHLRLLT DSAPEQQTAN
TLNDRERALL AREIEKDTLG GLRLGTHYVS WERLDHFDGV LLRVHTLREG IQGNFGSISI
ALTLLWVLFT AMLLISWGVI RHMVKNMFVL QNSLQWQAWH DPLTRLYNRG ALFEKASRLA
KRYREARQPF SVIQLDLDYF KSVNDRFGHQ AGDRVLSHAA GLIGSTIRAH DIAGRVGGEE
FCIVLPGATK AQALQIAERI RQRINDKEIL VTKSTTLRIS ASMGISSAEE YGDYDFEQLQ
SLADKRLYYA KQSGRNRICA SDATQEREKK